Sphingobacterium sp. R2: VXM68_09025
Help
Entry
VXM68_09025 CDS
T10631
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00010
Glycolysis / Gluconeogenesis
sprz00020
Citrate cycle (TCA cycle)
sprz00260
Glycine, serine and threonine metabolism
sprz00280
Valine, leucine and isoleucine degradation
sprz00310
Lysine degradation
sprz00380
Tryptophan metabolism
sprz00620
Pyruvate metabolism
sprz00630
Glyoxylate and dicarboxylate metabolism
sprz00640
Propanoate metabolism
sprz00670
One carbon pool by folate
sprz00785
Lipoic acid metabolism
sprz01100
Metabolic pathways
sprz01110
Biosynthesis of secondary metabolites
sprz01120
Microbial metabolism in diverse environments
sprz01200
Carbon metabolism
sprz01210
2-Oxocarboxylic acid metabolism
sprz01240
Biosynthesis of cofactors
Module
sprz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sprz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sprz_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sprz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VXM68_09025 (lpdA)
00020 Citrate cycle (TCA cycle)
VXM68_09025 (lpdA)
00620 Pyruvate metabolism
VXM68_09025 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
VXM68_09025 (lpdA)
00640 Propanoate metabolism
VXM68_09025 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VXM68_09025 (lpdA)
00280 Valine, leucine and isoleucine degradation
VXM68_09025 (lpdA)
00310 Lysine degradation
VXM68_09025 (lpdA)
00380 Tryptophan metabolism
VXM68_09025 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VXM68_09025 (lpdA)
00670 One carbon pool by folate
VXM68_09025 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sprz04147
]
VXM68_09025 (lpdA)
Enzymes [BR:
sprz01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VXM68_09025 (lpdA)
Exosome [BR:
sprz04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VXM68_09025 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
DAO
NAD_binding_8
HI0933_like
GIDA
Lys_Orn_oxgnase
3HCDH_N
Thi4
FAD_binding_3
2-Hacid_dh_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
XCY07075
LinkDB
All DBs
Position
complement(2168112..2169500)
Genome browser
AA seq
462 aa
AA seq
DB search
MNYDIIVIGSGPGGYVAAIRAAQLGFKTAIIERESLGGICLNWGCIPTKALLKSAQVFEY
LNHAADYGINVQGGEADFEAIVKRSRGVAEGMSKGIQFLMKKNKIDVINGTAKIKKGGKI
DVKGADGSTKEYSAKHTILATGARSRELPNLPQDGKKIIGYRQAMTLPKQPKSMVVVGSG
AIGVEFAYFYNAIGTKVTIVEFMDRIVPVEDEEISKQLEKSLKKQGISVLTKSEVQSVDT
SGELSKVSIKTEKGVEVIEAEVVLSAVGIAPNIENIGLEEVGVKTDRGRVVVDDYYKTNI
EGVYAIGDIVKGQALAHVASAEGITCVEKIKGLHVEPIDYNNIPGCTYCSPEIASVGYTE
KAAKEAGYEIKVGKFPFSASGKASAAGAKDGFVKVIFDAKYGEFLGAHLIGANVTEMIAE
VVVARKLETTGHEMIKTIHPHPTMSEAIMEACADAYGEVIHL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgacatcattgtaatcggtagtggtccaggcgggtatgttgctgccattaga
gccgctcagttagggttcaaaacagcgattattgaacgcgaatcattaggcggaatctgt
ctaaactggggctgtatccctacaaaagcattattgaaaagtgctcaggtatttgaatat
ttaaaccatgccgctgattacggcatcaatgttcaaggtggtgaggccgattttgaagct
atcgtcaaaagaagtcgcggagttgctgaaggaatgagtaaaggtatacagtttttgatg
aaaaagaataaaatcgacgttatcaatggtactgcaaaaattaaaaaaggtggtaaaatc
gatgttaaaggagcagacggttctactaaagaatattcggcaaaacatactatccttgcg
actggtgcacgttcgcgtgaattgcctaatttacctcaagatggtaaaaagataatcggt
taccgtcaggcaatgacactacctaaacagccaaaatctatggttgttgtagggtctggt
gctatcggtgtcgaatttgcttatttctataacgctattggaacgaaagtgactatcgtc
gaatttatggatagaatagttcctgttgaagatgaagaaatttcaaaacaattagagaaa
agtttaaagaaacaaggcatctctgttttaacaaagtctgaagttcaatctgttgataca
tcaggtgagttgagcaaagtttcaatcaaaaccgaaaaaggtgtagaagtgatcgaagct
gaggtggtattatcggctgttggtattgccccaaatattgaaaatataggattagaagaa
gttggtgtaaaaacagatcgtggacgtgttgtagtagatgattactacaaaaccaacatc
gaaggcgtatatgctatcggagatatcgttaaaggtcaagccttggctcacgttgcatca
gcagaagggattacttgtgttgaaaaaatcaaagggctacatgttgaaccgatcgattac
aacaacatccccggctgtacgtattgttcaccagaaattgcatctgtaggttataccgaa
aaagctgccaaagaagctggttatgaaattaaagttggtaagttccctttctcagcttct
ggaaaagcttcagctgcaggtgcgaaagatggctttgtaaaagttatttttgacgctaaa
tatggtgaattcctaggtgcacacctcattggagctaatgtaacagaaatgattgcggaa
gttgttgttgcccgtaaattggaaacaacaggtcacgaaatgattaaaacgatccatcct
cacccaacaatgagtgaagcgatcatggaagcttgtgctgatgcttacggtgaggtaatt
cacttataa
DBGET
integrated database retrieval system