Sphingobacterium sp. R2: VXM68_09980
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Entry
VXM68_09980 CDS
T10631
Name
(GenBank) penicillin-binding protein
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00550
Peptidoglycan biosynthesis
sprz01100
Metabolic pathways
sprz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VXM68_09980
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VXM68_09980
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sprz01011
]
VXM68_09980
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sprz03036
]
VXM68_09980
Enzymes [BR:
sprz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VXM68_09980
Peptidoglycan biosynthesis and degradation proteins [BR:
sprz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VXM68_09980
Chromosome and associated proteins [BR:
sprz03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
VXM68_09980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
YpmT
Motif
Other DBs
NCBI-ProteinID:
XCY07254
LinkDB
All DBs
Position
2398044..2400161
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AA seq
705 aa
AA seq
DB search
MSIRNTILVRVYFAFGLIVLLAFLVFGKMAKLQYVDGQHWKALADSLSIQEREVEAARGN
IYSNDGSLLATSVPEYELRFDAMAIPEEDEEYFNLKVDSLAIKLADFFKDKSSRQYLTLL
KQARNKKQRYLLLKRNVSHQDLKRVKQFPLLKSARVNKERFPSCLITDRQNKRILPFVNL
AARTIGYKNVKENIHVGLEGAYGEYIDGKSGKRLMQRIAGGVWIPVNKDIEVAPVDGSDI
ISTIDVNMQDMAQRALEKQMITSNADEGCVVMMEVKTGEVRAVANFMRDKDGVYREKFNL
AIAQSADPGSTFKLASYLALIDDKKIDSSTTVNIGNGNWPIYKHTIRDSHAPKKSVISAK
RAFEESSNVGVTKFVYQAYKDNPDQFTSKLHSFGFGKTLGLQIPGEGVPLVKSSKSKSWS
GLSLVQMAYGYEMKITPLQTLTFYNAVANNGKLIAPLFVKEIRHLGNTIQTFKAKVLNEK
IASDHALSEVRGMMEGVMTEGTGKSVASPLYSSGGKTGTAQMADGSRGYGARRYQSSFAG
YFPAEDPKYSIIVVIRNPRNGYYGGSVAGPVFKELADMVYANDMEMKGKKTFKAVNVGGK
MPLTLQGSREASKKVYDRLGINTVNWDTIARGEVDTSTRGVPFVDLKYREGIVPNVVGMG
LMDALYVVENAGFKAHVTGKGRVGIQSLVAGQKLPFGTAINLELK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagaaatacgattcttgttcgtgtctactttgcttttgggcttatcgtgttg
cttgcgtttttggtgtttggaaaaatggcaaagttgcagtatgtcgatggacagcattgg
aaagctctagcggatagcctttctattcaggaacgggaggtggaagctgctcgtgggaat
atttattcaaacgacgggagtttgctggctacttcagtgcctgagtatgagcttcgtttc
gacgccatggctattccagaagaggatgaagagtatttcaacttaaaagttgactccttg
gcgattaagcttgctgatttctttaaagataaatcatctcggcagtatttgacattatta
aaacaagcacggaataaaaagcaacgctatttgctgcttaaacgtaatgtatcgcatcag
gatttgaaaagagtaaagcaatttccactgcttaaatctgctcgcgtcaataaggagcgt
tttccaagttgtttgattacagatcgccaaaacaaacgtattttgccttttgtcaatctt
gctgctagaaccatcggttataaaaacgtgaaagaaaatattcatgttggactggaaggt
gcatatggagaatatatcgacggaaaaagtgggaaaagattgatgcagcgcatcgcagga
ggtgtatggattcctgttaacaaagatatcgaagttgctccagttgatggctctgatatt
atctctaccattgatgtaaatatgcaagatatggcgcaaagggcgctagagaagcagatg
attacgagtaatgcagatgaaggttgtgttgtgatgatggaggtgaaaacaggggaggtg
cgtgcggtggccaactttatgcgcgataaagatggggtctatcgtgaaaagttcaatctt
gccattgcgcaaagtgcagatccggggtcaacgtttaagctagcttcttatctagctttg
attgatgataaaaaaattgactcgagtacaactgtaaatattggtaatggtaactggcca
atttacaaacataccattcgtgattcacatgcgcccaagaagtcggtaatttcggctaaa
agagcttttgaggaatcgtcgaatgtgggggttactaaatttgtttaccaagcgtataaa
gataatccagaccaatttacctcgaagctgcattctttcggtttcgggaaaacactaggt
ctgcagattccgggagaaggagtacctctggtaaaatcgtcgaagagcaagagctggagt
ggattgtctttggtgcagatggcttatggctatgaaatgaagattaccccgttgcaaacg
ttgacattttataatgctgttgcaaataacggtaaattgatagcgccactctttgttaag
gaaattcggcatttggggaatacgattcaaacgtttaaggctaaagtcctcaatgaaaag
atagcttcagaccatgctttatcagaagtgaggggaatgatggaaggggtgatgactgaa
gggacaggtaaaagcgtagcgagcccgctgtatagttctggtggaaaaactggtactgcc
cagatggcagatggttcgagaggatatggtgcacgacgctaccaatcttcctttgcaggg
tactttccagctgaggatccgaaatattccattattgtggtgatccgtaacccgagaaat
ggatattatggtggatcagttgcagggcctgtatttaaagagcttgccgatatggtgtac
gcgaacgatatggagatgaaaggaaaaaagacgtttaaagcggtcaatgtaggtggaaaa
atgccgttgactttacaagggtcgagagaagcgagtaaaaaagtgtacgataggttggga
attaatacggtgaattgggatacaattgcgcggggagaagtggatacatctacgcgggga
gtgccgtttgtagacttgaaatatagagaaggaattgttccgaatgttgttggaatggga
ttgatggatgccctatatgtggtagaaaacgcaggctttaaagcacacgtgactggaaaa
gggagagtgggaatacagtcactcgtagctgggcagaaactgccttttgggacggcgata
aatttagaacttaagtaa
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