Sphingobacterium sp. R2: VXM68_09995
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Entry
VXM68_09995 CDS
T10631
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00470
D-Amino acid metabolism
sprz00550
Peptidoglycan biosynthesis
sprz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VXM68_09995 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VXM68_09995 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sprz01011
]
VXM68_09995 (murD)
Enzymes [BR:
sprz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VXM68_09995 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sprz01011
]
Precursor biosynthesis
Amino acid ligase
VXM68_09995 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
AlaDh_PNT_C
DAO
Pyr_redox_3
Red1
Motif
Other DBs
NCBI-ProteinID:
XCY07503
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All DBs
Position
2402873..2404246
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AA seq
457 aa
AA seq
DB search
MSNIATTYYPQSGSLVVLGAGESGVGTAILAKEKGFDVFVSDKGLIADHYKEQLKAEGIA
FEEGNHDEERILNADLVVKSPGIPETVPLVVALKAKNIPVIAEIEFAAQYTDAKLICITG
SNGKSTTTMLTYEMLKHGGLNVGLAGNIGKSFALQVAKEQFDCYVLEISSFMLDDMYHFR
ADVAVILNITPDHLDRYDHKMENYVDSKFRMIQNQTEKDYFIYCLDDPETIKGLERHRSK
GTYLPFTQEQLVELGAYLNANKTIIINTPNNDTFTMRAEELSLQGKHNIYNSMASGLIAK
VQELRNQVMKESMGSYVNIPHRLEHVACIGGINYINDSKATNVNSVWYALESFSTPIVLL
LGGVDKGNDYSMLADLVKNKVRAIVCLGKDTAAIHTAFEQDVEIIVNSTSMQDAVVLASH
LAQKGDTVLLSPACASFDWFKNYEDRGDKFKAAVMEL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacattgcaacaacatattatcctcaatctggaagtttggtcgttttaggcgca
ggcgaaagtggcgttggaacggctattctcgcaaaagaaaaaggatttgatgtatttgtc
tcagataaagggcttatagcggatcattataaggaacagttgaaagctgaggggatagca
tttgaagaaggtaatcatgatgaggagcgtatattaaatgcggatttggttgtgaagagt
cccggtattccagagacggtgcctttggttgtcgcattgaaagcaaagaatatacccgtg
attgcagaaattgaatttgcggcacaatataccgacgcaaagttaatctgtattacagga
tcaaacggaaagtctacgacgacgatgttgacttatgaaatgcttaagcacggtggctta
aatgttggattggccggtaatattggaaagagctttgcgcttcaggtagctaaagaacaa
tttgattgttatgtactggaaatatcgagctttatgctggacgatatgtaccattttaga
gcagatgttgctgttatattgaatattacgcctgatcatttggatcgctatgaccataaa
atggaaaattatgtggattcaaaattcaggatgattcagaatcaaacggagaaggattat
tttatatactgtctagacgatccagaaacaattaaaggattggaaagacatcgtagtaaa
gggacttatttgccttttacgcaagaacaacttgtcgagttgggcgcttatttgaatgcc
aataagacaataattatcaatacaccaaataacgatacattcactatgagagctgaggaa
ttgtcattgcaggggaagcataatatttataatagcatggcttccgggctaatcgcgaaa
gtgcaggaattgagaaatcaagtgatgaaggagagcatggggtcgtatgtgaacattcca
catcggcttgagcatgtggcctgtatcggcggtataaattatattaacgattcaaaggca
acgaatgtcaattcagtttggtatgctttggaaagtttctctacaccaattgtattgctt
ttgggcggtgtggataaaggaaatgattacagtatgcttgctgatttggtgaaaaacaaa
gtgcgcgctattgtctgtctgggtaaagatactgctgcaattcatacggcatttgaacaa
gatgtggagattattgtcaatagcacctccatgcaagatgcggtggtgttggcttcgcat
ttggcgcaaaaaggtgataccgtattgttgtccccggcatgtgccagttttgattggttc
aagaactatgaagaccgtggcgataaatttaaggctgctgtcatggaattataa
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