Sphingobacterium sp. R2: VXM68_10610
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Entry
VXM68_10610 CDS
T10631
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00300
Lysine biosynthesis
sprz00470
D-Amino acid metabolism
sprz01100
Metabolic pathways
sprz01110
Biosynthesis of secondary metabolites
sprz01120
Microbial metabolism in diverse environments
sprz01230
Biosynthesis of amino acids
Module
sprz_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VXM68_10610
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VXM68_10610
Enzymes [BR:
sprz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
VXM68_10610
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Tox-ODYAM1
DUF4729
Motif
Other DBs
NCBI-ProteinID:
XCY07379
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Position
2564571..2565947
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AA seq
458 aa
AA seq
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MNTTFFPLTPILHPWVNHLTKEPKELFERIEQYGSPVNIHHFKPLNENIHAYQTVLNKYN
VIHKIFFARKANKCLQLAQAVADAGQGVDTASFRELQQCLDAGIASEQLVLTAAVKNRQL
FELALKHNVTVVLDNEDELELAQDVAAMFGKTLLINIRVGGFHVNGQRLPTRFGFAIDSV
AERIEGLAEIYPHLKYNGLHFHLNGYSIDERVAAIEQSVQVIDALHDLGIHTRSLDIGGG
ILMNYLKSHQEWLSFHTALREAVLGNRPELTYQNDALGMVKIEDKLYGEPTVYPYFNEIH
KEKLLEHILTAHSSIYGLPIHRLFTDRRLELRMEPGRSLLDQVGCTLAKVAFRKKDSEGR
LLVGLEMNRTQLRSSSADFLLDPLHLPKQQVDDSDEPCYAYLVGSYCLEQELILKRQIKL
QKYPEIGDLILFPNTAGYMMHFYESEAHLFELAKNVFI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacattttttcccttaacacccattctgcatccttgggtaaatcatcttacc
aaagagccgaaagaactttttgaacgaattgaacaatacggatcaccagtcaatatacat
cactttaagcctctaaatgaaaatatacatgcttaccagactgtactaaataagtataat
gtcattcacaagatattcttcgcccgtaaagcaaataaatgcctgcaacttgctcaagcc
gtggcggatgccggccaaggtgtggataccgcaagctttagggaacttcagcaatgcctt
gacgcaggaatagccagtgagcaactcgtgctgactgctgcagtcaaaaatcgacagctc
tttgaattggcattaaagcataatgtcaccgttgtgttggataacgaagatgagttggaa
ttagcacaggatgttgccgcaatgtttggaaaaaccttgctaattaacatacgtgtagga
ggatttcatgtcaatggccaacgattaccaacacgttttggctttgctatcgatagtgtt
gcagaacgcattgaaggtttggcagaaatctatcctcacctcaaatacaacgggctgcat
tttcatcttaatggctattcaattgacgaacgtgttgctgccattgaacagtcagtacag
gtgattgatgcattgcatgacttaggaatacacacgcgatcgctcgatattggcggaggt
atcctgatgaattatcttaaatcgcaccaagaatggttatcctttcatacagcattacgt
gaagccgtactcggcaatcgacctgaacttacttaccagaatgatgccttaggtatggtc
aagatcgaggataagctttatggcgaacctactgtatatccatatttcaatgagatccat
aaggaaaaattattagagcatattctcacagcccattccagcatctatgggctcccaata
caccgactctttacagatcggaggctggaattacgcatggaacctggccgttcattgttg
gatcaagtaggttgtacgttggcaaaggtggcctttcgcaagaaagatagcgagggtcgt
ctgcttgtggggttggaaatgaaccgtacacagttgcgtagttcgagtgccgacttttta
ttggatcctctgcatctacccaaacagcaagtcgatgattcagatgagccctgttatgca
tatcttgtcgggagttattgtctcgaacaagagttgattctcaaacgacaaattaagctg
cagaaatatccggaaattggagatcttatcctttttcccaacacagcaggttacatgatg
catttttacgaatcggaagcacacctcttcgaacttgcaaagaatgtatttatctag
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