Sphingobacterium sp. R2: VXM68_11415
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Entry
VXM68_11415 CDS
T10631
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_11415
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_11415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
SusD-like_2
TPR_12
TPR_7
TPR_8
TPR_2
Motif
Other DBs
NCBI-ProteinID:
XCY03263
LinkDB
All DBs
Position
complement(2758988..2760373)
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AA seq
461 aa
AA seq
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MKLNINNNILLFAITSATLLVSSCSKFVELGAPPNQVLAGEAFATDASANSVIRGLYTTT
LSINLPGTSTFYTGVAADDLQYNSADPNTSEFASNNLLNTNYNVANFWYNTYQLIKNANN
AISGLEASTSLTPSVKDQLLGEAKFFRAYAYFYLVNLYGDVPLQLRDDLHAFEDAVLPRT
PAQQVYDQIIADLKDAESKMAPTYDATASPRGRANKAAASALLARVYLYQKDYQNAESYA
TKVLQSTDYGMPTPDKNFVNSSNEVILQLGNQTGVTTFGANYITTATVTPGYTLPDAVYN
SFETLPTPDLRKINWTSSKTVSNKTYYAITKYKASSGAGSEYHVMLRLAEQYLIRAEARA
KLGKLTEARTDLDAVRSRAGLAGLNTSLNQSQLLSAIETERLHEFFGEFGHRWLDLKRTD
RANAVLAPIKSNWQTTDVLFPIPQAQILINRNLTQNPGYEN
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaacatcaataacaatatattattattcgccatcaccagtgcaacgctgctt
gttagctcctgttcaaaatttgtggagttgggtgctcctccaaatcaggtgctagcgggt
gaagcgttcgctacagacgcttctgcaaatagcgtgatcagagggttgtataccacaaca
ttaagcattaatcttcctggaacgtcaacgttctatactggggtagcagccgacgacctt
cagtacaattcggccgaccccaatacctccgaattcgcgagtaataatctgctgaataca
aattataatgttgccaacttttggtacaatacctatcagcttatcaaaaatgcgaataac
gcgatatccggtctcgaagcatccacctcccttaccccaagtgtaaaggatcaactcctg
ggagaagcaaaattttttagagcttatgcctatttctatctcgtcaatctgtatggtgat
gtgccgttacaattgcgcgatgacctgcatgcatttgaagacgctgtactaccgcggacg
cccgcacagcaagtgtacgatcagattattgcagatcttaaagatgcggagagcaaaatg
gcaccaacttatgatgctactgccagtccaagagggcgcgccaataaggctgccgccagc
gctttactggccagagtatatctttaccaaaaagattatcaaaatgccgaatcttatgca
actaaagttttgcagtcaaccgattacggtatgcccacacctgataaaaactttgtaaac
tcgagcaatgaggttattcttcaacttggcaatcagactggagtaaccacattcggtgct
aattatataacgacagctacagtgactccgggatacaccctgccagatgccgtatacaac
agttttgaaaccttgccaacacctgatttaagaaagatcaattggacaagttcaaagacg
gtatccaataaaacctattatgccataaccaaatataaagcgtcctcaggcgcaggatcc
gaataccacgttatgctacgtttagctgaacaatatcttatccgtgcagaagctagggcc
aagctcggaaaattaacagaagcacggacggatctagatgccgtacgcagtcgtgcgggc
cttgcgggacttaacacaagcttaaaccaatcccagttattgtctgctatagagaccgaa
cgtctccatgaattttttggtgagtttggccatcgctggctcgatcttaagcgcaccgac
cgcgctaacgccgtattggccccaatcaaatcaaactggcaaacgacggatgtcttattt
ccgattccacaagcgcagattttaatcaatagaaacttgacacaaaatccaggatacgaa
aattaa
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