Sphingobacterium sp. R2: VXM68_11730
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Entry
VXM68_11730 CDS
T10631
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz03030
DNA replication
sprz03430
Mismatch repair
sprz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VXM68_11730
03430 Mismatch repair
VXM68_11730
03440 Homologous recombination
VXM68_11730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sprz03032
]
VXM68_11730
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_11730
Enzymes [BR:
sprz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VXM68_11730
DNA replication proteins [BR:
sprz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VXM68_11730
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VXM68_11730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
DNA_pol3_delta_C
AAA_22
RuvB_N
AAA_5
AAA_14
Rad17
AAA_2
AAA_30
AAA_24
AAA_18
RCF1-5-like_lid
AAA_7
AAA_16
RNA_helicase
nSTAND3
DUF815
VapE-like_dom
AAA_assoc_2
AAA_33
Motif
Other DBs
NCBI-ProteinID:
XCY03324
LinkDB
All DBs
Position
2846737..2848587
Genome browser
AA seq
616 aa
AA seq
DB search
MDNFIVSARKYRPITFDSVVGQQHITGTLKNAIHNNQLAQAFLFCGPRGVGKTTCARILA
KTINCENILEGTEPCGECDSCKSFQNGNSFSIHELDAASNNSVDDIRNLIEQVRIPPQAG
KYKIYIIDEVHMLSQAAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFNRI
KVEDMAKHLASIADRESIAYDQDGLHIIAQKADGGLRDALSMFDQIVSFSNKNVTYQAVI
DNLNILDYDYYFKLTDAILTEDAAQSLLLFNEILNHGFDGSHFVAGLSSHFRNLLVAKEP
STLKLLEVSDSIRQKYMQQAQKASPGFLLSALNISNQCEINYKTSKNQRLQVELSLLKTC
HIAHAIKLSQLGSVQMSSASEEVKKKLPEPIAAQPKQGASAVVTPTIISSSNVPVIEKQV
APPPPQATPVNYQASDAKAEPKKDPVSNVPPKVKKGGWGASASAIIPSLPNLNTIYDNNT
VAKEGDEPELIRGSEQRDVSYGQFIAVWNSYAEQLKAENKINMYTMMTAMQPRLNGVLIE
IDVENGVQMDVLQSAKVDVLNYLRVKLQNFSLDLKGVMMEHTISRKPYTSQEKYQAMVNK
NPLLDTLRKEFNLGLS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggataattttattgtttctgcacgtaaataccgcccgattacctttgattcggttgta
ggtcagcaacacattacgggtaccttaaagaatgcgatacacaacaaccagttggcgcag
gcatttttgttttgtggtcctcgtggtgtgggtaaaactacctgtgcacgcattttagct
aaaacaataaattgtgaaaatatcttagagggtactgagccatgtggcgaatgcgacagc
tgtaaatctttccaaaacggtaattcatttagtattcatgaactggatgcagcatcgaat
aactcggtcgatgatatccgtaatcttattgagcaagtgcggatacctccacaggcagga
aaatataaaatctatatcatagatgaggtccatatgttgtctcaggcggctttcaatgca
tttttgaagaccctcgaggaaccgccttcttatgcaatatttattctggcaacgacagag
aaacataagattttaccgacgatactttcgcgttgtcagattttcgattttaaccgaatc
aaagtggaagatatggctaaacatttggctagtatcgcagatcgggaaagtatcgcttat
gatcaggatggattgcatatcattgcacaaaaggcagacggtgggcttcgagatgcgctg
tcgatgtttgatcagatcgtcagcttctccaataaaaatgtcacctaccaagctgtcatt
gataatctaaatattttagattacgactattatttcaagttaacagatgctattttaacc
gaagacgcagcacaatccttactgcttttcaatgaaattttgaaccacggatttgatggc
agtcatttcgttgcaggtctgtcatcgcatttcagaaacttgctcgttgccaaagaaccg
tcaactttaaaattgctagaagttagtgacagtattcgtcaaaaatatatgcagcaagct
caaaaggcttctccgggatttttgttatcagcattgaatatttccaatcaatgtgaaatt
aactataagacgagtaaaaatcaacgtttacaggtcgaactttcacttctcaagacctgc
catatagctcatgcgatcaaattgagccagcttggatccgtccagatgtcttcggccagc
gaggaagtaaaaaaaaaacttcctgagccaatagcagcacagccaaaacaaggggcttcg
gctgtcgttacaccaacgataatttcatcaagcaatgttcctgttattgaaaaacaggtt
gcgccgccacctccacaagctacccctgtaaattatcaggcttcggacgcaaaggccgaa
ccgaaaaaggatcctgtttctaatgtccctcccaaagtgaaaaaaggagggtggggggct
tccgcttcggcaatcattccatctttgccgaatttgaataccatatacgataataatacg
gttgccaaagaaggggatgagccagaattgatacgtggtagtgaacaacgcgatgtttca
tacggtcaatttattgcggtttggaacagttatgctgaacagcttaaagcagaaaacaag
atcaacatgtacaccatgatgacggccatgcaaccccgacttaatggtgtattgatcgaa
attgatgtcgaaaatggcgttcagatggatgtgttgcaaagtgcaaaggtcgatgtgctg
aattatctgcgtgtgaagctccagaatttttcgttggatctaaagggggtgatgatggag
catactatttcgcgcaaaccctatacctcacaagagaagtatcaagccatggtcaataaa
aacccactattagatacgttgcggaaggagtttaacttgggtctaagctaa
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