Sphingobacterium sp. R2: VXM68_12480
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Entry
VXM68_12480 CDS
T10631
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sprz02022
]
VXM68_12480
Two-component system [BR:
sprz02022
]
NtrC family
Unclassified
VXM68_12480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA
AAA_2
AAA_5
AAA_19
Mg_chelatase
AAA_7
Torsin
nSTAND3
TIP49
T2SSE
AAA_22
AAA_16
TsaE
Parvo_NS1
AAA_30
TP_0454_N
nSTAND6
BRCT_3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
XCY07509
LinkDB
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Position
3036572..3037912
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AA seq
446 aa
AA seq
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MVNRILLIDDEEKLRKLLSKIINLEGFDVIEAGDIKSGLKKLEVNDVDVVLCDVKLPDGN
GVETAKLIKERYPMVEVILLTAYGNIPDGVMAIKNGAFEYITKGDDNNRIIPLLYKACEK
VALARRVQQLEKRLGDRLSFDKIIGKSHVIQAAIGMAQKVAITNTTVLLTGETGTGKEVF
AQAIHQASSRRDRNFVAINCAAFTKDLLENELFGHKSGAFTGATKDQRGLFEEAHLGTIF
LDEIGEMALELQAKILRVLETGEFLKVGDSKPTKVDVRIIAATNRNLETELASDHFRSDL
FYRLSVFTIELPPLRERVQDIVPLAQYYADIFAVKSNLKPLQMSPAFMQALEHNVWRGNI
RELKNVIERSVILSEDGVLDIQSLPFGEREYREGAGGASNFSMTNIERQHIQRVLKHTNG
NKAEAARLLEIGIATLYRKIEEYKIQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
attgtgaatagaattctccttatagacgacgaagagaaacttcggaaattgctgtccaaa
attattaacttggaaggttttgatgtgatcgaggcaggggatattaaatcgggattgaaa
aaacttgaagtcaatgatgtagatgttgtgctttgcgatgttaaactgcctgacggtaac
ggggtggaaactgctaaattgattaaggagcgatatccaatggtggaagttatcttattg
acggcttacgggaatatacctgatggggtgatggcaataaaaaatggcgcttttgaatac
attaccaaaggggatgacaacaatcgcattataccattgctttataaagcttgcgaaaag
gttgcattggctcgaagggtacagcagttagaaaaacgattaggagatagactttctttc
gataagattattggaaaatctcatgtgattcaagcggccatcggaatggcgcaaaaagtt
gctattacaaatacaacggttctactaactggagaaactggtaccggcaaagaggttttt
gcacaggcaattcatcaggccagttcgaggagagaccgtaattttgtggctattaactgc
gccgcatttacaaaagatctgctggaaaatgaattgtttggccataaatccggtgctttt
accggagcgacgaaagatcagcgcggcttgtttgaagaagcacatttgggtacaattttt
ctggatgagatcggggagatggctttggagctgcaggctaaaattcttcgtgttttggaa
accggagagtttttgaaagtaggcgattccaaaccaacgaaagtggatgtacgaatcata
gctgctaccaacagaaatctagaaactgaacttgcttctgatcattttaggagtgatctt
ttttacagattatctgtttttacgatagaactacctccgcttcgcgagcgggtacaagat
attgtgcccctggcgcaatattacgccgatatttttgctgtaaaatccaatttgaaacct
ttgcagatgagccctgcatttatgcaggccttggaacacaatgtatggcggggaaatatt
cgtgaactgaaaaacgtgattgagcgcagtgtcattttaagtgaggacggcgtgctggat
attcagagtcttccttttggagaacgtgagtatagagaaggggcggggggggcgtcaaac
ttttcgatgacgaatatagaaaggcagcatatacagcgtgtattgaaacatacgaatgga
aataaagcggaggctgctcgattgttagaaatcggtatagctaccttatatcgaaaaatt
gaagaatataaaattcaatga
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