Sphingobacterium sp. R2: VXM68_15295
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Entry
VXM68_15295 CDS
T10631
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VXM68_15295 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_15295 (xth)
Enzymes [BR:
sprz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
VXM68_15295 (xth)
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VXM68_15295 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Ins_allergen_rp
CG7065_mid
Motif
Other DBs
NCBI-ProteinID:
XCY04009
LinkDB
All DBs
Position
3721720..3722502
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AA seq
260 aa
AA seq
DB search
MKIATYNINGINARLPVLLRWLAEESPDVVCLQELKSPQERFPLKEISDLGYHAIWHGQK
SWNGVAVLSKYEIEEITRVLPGDPEDNQSRYLEVIIQNVVICCIYLPNGNPLPGAKYDYK
LNWIERLNKRSKTLLKMNVPAILIGDFNIIPGEIDTYKPEKYSDDALFTKEVRDAFSLLL
TDGWQDAIRSLFPDKEVYTFWDYFRHAYARNAGMRIDHILLSPSIQARLMEGGIDRDVRG
WEKSSDHAPTWIRLNNNTNG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagcaacttataatataaatggtatcaacgcgcggcttccagtccttttaaga
tggttggcagaagagtcgccagatgtggtttgtcttcaagaactaaaatcgccccaggag
cgttttccgttgaaagagataagtgatcttggctatcatgccatttggcatggccagaaa
agttggaacggagttgcggtgctttcgaaatacgagattgaagaaatcacaagagttctc
cccggagatcctgaggataatcaaagtcgatatttggaagtcataatccaaaacgttgtc
atatgttgtatttatctaccgaatggcaatcctctcccaggggccaaatatgattacaaa
ttaaattggatagaacggttgaacaaaaggtctaaaacacttcttaagatgaatgtaccg
gctattctgatcggtgatttcaatattattccaggagagatagacacctataagccagaa
aaatatagcgatgatgcactctttacaaaagaagttagggatgctttcagtctactgcta
acagatggatggcaagatgctatacgttcactttttccagataaggaagtttataccttc
tgggattattttaggcatgcctatgctcgaaatgcagggatgcgtatagatcacattctt
ttgagtccttcgattcaggctcggttaatggaaggtggtatagatcgggatgttcgtgga
tgggagaagagtagcgatcatgcccctacatggattagattaaataataacacgaatggc
tag
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