Sphingobacterium sp. R2: VXM68_16925
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Entry
VXM68_16925 CDS
T10631
Symbol
rocD
Name
(GenBank) ornithine--oxo-acid transaminase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00330
Arginine and proline metabolism
sprz01100
Metabolic pathways
sprz01110
Biosynthesis of secondary metabolites
Module
sprz_M00972
Proline metabolism
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VXM68_16925 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sprz01007
]
VXM68_16925 (rocD)
Enzymes [BR:
sprz01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
VXM68_16925 (rocD)
Amino acid related enzymes [BR:
sprz01007
]
Aminotransferase (transaminase)
Class III
VXM68_16925 (rocD)
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GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
XCY04326
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Position
complement(4095346..4096605)
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AA seq
419 aa
AA seq
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MSTVVKHGKGDLFIAKEEKYGAHNYHPLPVVLERAEGVLVWDVDGRAYFDFLSAYSAVNQ
GHCHPRIIHALKEQAEQLTLTSRAFYNNKLGDFEEMLCQLFGFDKALVMNSGVEAVETAM
KLCRKWAYQVKGIVPNQAKIVFAKDNFHGRTISVISASNDNTATHEFGPFLEGIVLVPYN
DVDALEQLFKADKNIAGFIVEPIQGEAGIVVPDEDYLKRVRKLCTAYNVLFIADEIQTGI
ARTGSMLASYNIEDEHSDSKPDVLILGKALSGGVFPVSAVLANDSIMLCIKPGEHGSTYG
GNPLACAVAMEALNVVRDENLTQRAFKMGTLFLDGLRRIAAKCTLITEVRGKGLLTAIVI
DADEESDLAWNICLKFKENGLLAKPTHGNKIRLAPPLVITKEQVETCLEIIERSLTNFK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagttgttaaacacggtaagggcgatttattcattgccaaagaagaaaaatac
ggagcgcacaattatcatcctcttccagtcgtattggagcgcgctgaaggcgtcttggtg
tgggatgtggatggaagggcctattttgatttcctttccgcatattctgcagtcaatcag
ggacactgtcatccaagaataattcatgccttaaaagaacaggctgagcaattgacactc
acttccagagcattctataataataaattgggtgattttgaggaaatgctctgtcaacta
ttcggattcgataaggcattagtgatgaattcgggagtagaagcggtagaaacagcaatg
aagctttgccgtaaatgggcttaccaagtaaaaggtatagtacctaatcaagcgaaaatt
gtctttgccaaggataattttcatggcaggacaatctctgttatatccgcatcgaatgat
aatacagcaacacatgaatttggcccctttttagaaggcatagtactcgttccgtataac
gatgttgatgcgctagaacagttatttaaagcagataaaaatattgccggttttattgtt
gagccgattcagggcgaagcgggtattgtcgttccggatgaggattatctaaagcgagtt
agaaaattatgtacagcatacaacgtcttgtttattgcagacgaaattcaaacgggtatt
gctcggacaggaagtatgttggcgtcctataatattgaagatgagcatagcgatagtaaa
ccagatgttttgattttgggcaaagctttatctggcggtgtatttccggtatcggcagtg
ttggcaaatgattccattatgttgtgtattaaaccgggcgaacatggttctacctatggc
gggaatccattagcctgtgcagtagctatggaagcgctaaatgttgtgcgggatgaaaat
ttgacgcaacgggcgtttaagatggggacattgtttttggatggattgcgtcggattgct
gccaagtgtacgttaattacagaagtgcgcgggaaggggctcttgacagccattgtaatt
gatgcggatgaagaaagtgatttggcctggaatatctgtctcaaatttaaagaaaatgga
cttttagcgaagcctacacatggtaacaaaattcggttggctccgcctttggttattaca
aaagagcaggtggagacttgcctagaaatcattgagcgatcgttgactaattttaaatag
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