Sphingobacterium sp. R2: VXM68_16965
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Entry
VXM68_16965 CDS
T10631
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sprz03110
]
VXM68_16965 (clpB)
Chaperones and folding catalysts [BR:
sprz03110
]
Heat shock proteins
HSP100
VXM68_16965 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
Sigma54_activat
AAA_16
nSTAND3
AAA_14
Zeta_toxin
IstB_IS21
Mg_chelatase
NACHT
AAA_7
T2SSE
TniB
AAA_3
AAA_24
AAA_18
Roc
DnaB_C
AAA_28
AAA_25
ATPase_2
Torsin
DNA_pol3_delta2
NBD_SMAX1
DUF87
Motif
Other DBs
NCBI-ProteinID:
XCY04331
LinkDB
All DBs
Position
4099242..4101839
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AA seq
865 aa
AA seq
DB search
MNFNNYTIKAQEAIQKASEIAAGHQQQAIETAHILKALLAVDENVVSHLLKKLNVNISYL
GTELDKQVEGFPKVSGSNIYLSSEANNALQKAQGYLKEFNDEFVSVEHLLLGILASSDKT
STLLKSQGVTEKDLKTAIKELRGNSRVTDQNAEATYNALGKYARNLNEYAESGKLDPVIG
RDEEIRRVMQILSRRTKNNPILVGEPGVGKTAIAEGIAYRIIKGDAPENLKSKTVFSLDM
GALVAGAKYKGEFEERLKAVVKEVTDSNGDIILFIDEIHTLVGAGGGEGAMDAANILKPA
LARGELRAIGATTLNEYQKYFEKDKALERRFQKVMVEEPDTQDAISILRGLKERYETHHK
VRILDESIIAAVELSQRYIADRFLPDKAIDLIDEAASKLRLEMDSVPEAVDELERRIMQL
EIEREALKRENDDKKVAELSESIANLSAERDTLRASWQEEKSLVDNVNQEIENIENFKLE
AEQAERSGDYGKVAELRYGRIKEAQEKVDRLKAELAEKQESKRMLKEEVTSEDIADVVAK
WTGIPVSKMIQSEREKLLNLEEELHKRVAGQDEAIEAISDAIRRSRAGLNDAKRPIGSFI
FLGTTGVGKTELAKALAEFLFDDEQSMVRIDMSEYQERHAVSRLIGAPPGYVGYDEGGQL
TEAVRRRPYSVVLLDEIEKAHPDVFNILLQVLDDGHLTDNKGRTVNFKNTIIIMTSNTGS
AIIQENFSHLTDDNRDEIVAKTRNEVFDVLKQSIRPEFLNRIDEVIMFTPLSRNEIGDIV
RLQFAHVQRQLAEQNIFITASDEAMDWLAQLGYDPIYGARPLKRVIQKRILNELSKEILS
GKVSRDSNIRLDVFDGKFVFINKNE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaacaattatacaatcaaagcgcaagaggccatacaaaaggcgtctgaaatt
gctgctggccatcagcaacaggcgattgagacagcgcatattttaaaagctttactcgct
gtggatgaaaacgttgtcagccacttattgaaaaaattaaatgttaacatcagctatctt
ggaactgaacttgacaaacaagttgagggttttcctaaagttagcggtagtaatatttat
ttaagtagtgaggcaaataatgcgttgcagaaagcacaaggttatttaaaggaatttaat
gatgagtttgtgtctgttgagcacctattgctcggtatcttggcaagttccgataagaca
tcaactttactaaaatcacagggtgttactgaaaaagatctgaagacagctatcaaagag
ttacgtggaaatagtcgagtaaccgatcagaatgctgaagccacctacaatgcgctagga
aaatatgcacgaaatttaaatgaatatgcggagtcaggaaagctggatccagttatcggt
cgtgatgaggaaatcagacgcgtgatgcaaatcctctcccgccgcaccaaaaacaaccca
atacttgttggtgaacctggggttggtaagacggctattgcagaaggcatcgcttaccga
attatcaaaggcgatgcacccgaaaatttaaaatctaaaactgttttttctttggatatg
ggtgcgttggttgccggagcaaaatacaaaggtgaatttgaagaacgtttaaaagcggtt
gtaaaggaagttacagattccaacggagacattatactatttatcgatgaaatacacaca
ttagtaggcgcaggtggcggtgaaggtgcgatggatgcggctaatatcctcaagccagca
ttggcaagaggtgaattgcgtgctattggtgctacaacgctgaatgaataccaaaaatac
tttgagaaagataaagcactggaacgtagattccaaaaagttatggtggaagaaccggat
acccaagatgcaatttccatcctcaggggcttaaaagaacgatacgaaacgcaccataaa
gtacgcatcctggatgaatcaattatcgcagcagtggaattatcgcagcgctatattgcc
gatcgctttttaccggataaagcaattgacttgattgatgaagctgcatctaaactacgg
cttgaaatggactccgtaccggaggcagtggacgagcttgaacgacgcatcatgcagttg
gaaattgagcgagaggctttgaagcgtgaaaatgacgacaaaaaagttgcagagctttcc
gaaagtatcgctaatctatctgcagagcgcgataccctgagagcttcttggcaagaagaa
aaaagccttgttgacaatgtaaaccaagagatcgagaacattgagaattttaagctcgaa
gctgaacaggcagagcgctccggggactacggaaaggtggccgaacttcgttatggacga
atcaaagaagcacaagaaaaggtcgacaggttaaaggcggaacttgcagaaaagcaagaa
agcaagcggatgcttaaagaagaagttacctctgaagatatcgcagatgtggtcgccaaa
tggactggaatacctgtgagtaagatgatccagtccgaacgagagaagttattaaatcta
gaagaagaactgcataaacgtgttgcaggtcaagacgaggctattgaagcaatttccgac
gcaattcgtcggtcacgcgcaggtctcaatgatgcgaaacgaccaataggatcttttata
tttctcggtactactggagtcggaaagaccgagcttgcaaaagcgctcgccgaatttcta
tttgatgacgagcaatcgatggttcgtattgatatgtcggaatatcaagaaaggcatgcc
gtatcacgtttaataggtgcgcctccgggatatgtaggttatgatgaaggcggacagttg
acagaggccgtgcgaagaaggccctactctgtggtgttattagatgaaattgaaaaggcg
catcccgatgtatttaatattttacttcaggtattggatgatgggcacctcacagacaac
aagggccgtacggtgaactttaaaaatacaattatcatcatgacatcaaatacaggttcg
gccattatacaagagaatttcagtcacttgaccgacgataatagggatgaaattgttgct
aaaacacgaaacgaggtatttgatgttttgaaacagtcgattcgtcctgagtttttgaac
cgaattgatgaggtgatcatgtttacaccactgagccgtaacgaaattggagacattgtc
cgtttacaatttgcccatgtgcaaagacagttagccgaacagaatatatttattacagct
tctgatgaagcgatggattggttagcgcaactcggttatgatcctatttatggagcacga
ccgctaaaacgtgtcattcaaaaaaggattttaaacgaactgtcaaaggagattttatcc
ggaaaagtaagtcgcgattccaatatccgcctggatgtattcgatggtaaatttgtcttt
atcaacaaaaatgagtaa
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