Sphingobacterium sp. R2: VXM68_17185
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Entry
VXM68_17185 CDS
T10631
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_17185
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VXM68_17185
Archaeal homologous recombinant proteins
VXM68_17185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
XCY04375
LinkDB
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Position
4148237..4151275
Genome browser
AA seq
1012 aa
AA seq
DB search
MIPLKLILEGIYSYQDRQTIDFTALLEAGLFGIFGTVGSGKSSILEAITYALYGETERLN
ARDKRGYNMMNLKSNKSYIELDFVNFEGRTFRVTREFKRNSKNFDDVKSPTVVLYEKLND
TWVPLESSNTQRIIGLSYENFKRTIIIPQGQFKEFIELGARERTDMMKEIFQLHRFDLQD
KVSALYKKNQSELDHLNGQLFGFEEITLDLVAATNEKLQVELQSFASIESSHKVQHEKFM
LLQKLKADFLELNRMKLRYEELLEQKGQKENLRLRLSRFEEAQAKFLHILQSKEKLDIDK
GSTQRKLANEEAKKAEIQQLILQHQSRLNVLKPKYELLPRRRMQELDLELIQQLITFSNE
IKGLQDRAEKGRHFVVEAKKQQAHYKAKIQETESEISNLKRAKPSPHELMELGRWYTKQQ
GIQQQEKELNKQLVDLENNASEIRRELKHADVNLEEFQSTHARVVHQLEQKLNKLQDEKA
HLLLQQRLSQYAKDLKEGSPCPLCGAIEHPMVNHGQDISLEILAHEKLMTDTTELLKLKQ
DQKFQVEKLVLRLQSLTDQKHELNTKIELHKSIEMAHFNEFVWTGYSSTDESIYASKKQE
LSKIDTLIQALENQLVNDQTALASVEENLEKYNKALGQFERDEVSKQAQINQNIGNLKLL
SWFDYESKDAQTVEEEYNAIKTSNITVEKEFVSINDKLSELNSQFAGQNSVVNAILERLQ
TIESEILEVDNTLQQHLLASPFNAIEEVKQILAQNLPVQQIRLELEQFQIDFETVKAQIA
QLEHKLVDQVYEETIFIEQEKALKESAQQLKESTENVAKLRQELNQLMISYAKKETLLQQ
QMKLNLRNENLKQLFNLFKGAGFVQYVSSIYLRQLCDHANIRFHRMTRNQLSLQINENNE
FEIIDYLNEGKSRSVKTLSGGQAFQVSLSLALALAESVQSSTKASKNFFFIDEGFGTQDN
ASINIVFETLLELRRENRIVGIISHVEELKERIPISLSIEKDEDHGSQIFIN
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgattccattaaagctaatattagagggcatctattcctatcaggatcgccagacgatc
gattttactgcacttctcgaagctggactttttggtattttcggcacagtgggctctggt
aaatcgtccatattagaagcgattacctatgcgttatatggggaaacagaacgtttgaat
gcacgcgacaaacgtggatataatatgatgaatctgaagtcaaacaagtcatatatagaa
cttgattttgtcaactttgaaggacgcacatttagagttacgcgcgaatttaaacggaac
tccaaaaacttcgatgacgttaaatcgccaacggtcgtgctctatgagaaattaaatgat
acatgggtaccattggaaagcagtaatacacagcgaataataggactaagctatgagaac
ttcaaaagaacaatcatcattccacaaggacaattcaaggaatttatagaacttggcgcc
agggagcgcaccgatatgatgaaagagatttttcaattgcatcggttcgacctacaggat
aaagtttccgcactatataagaaaaatcaatcggaattagatcacttgaatggtcaatta
tttggatttgaggagatcactttagaccttgtagcagccaccaacgaaaagttacaggtt
gaacttcaatctttcgcttctatagaatcttcgcataaagtacagcatgaaaaattcatg
ctgctccaaaaacttaaagcggattttcttgaattgaaccggatgaaattacgttacgag
gaattacttgaacagaaaggacaaaaggagaatttaaggctacgattaagccggtttgag
gaggcccaagccaaatttttacacatcctccaatccaaagaaaaattagatattgataag
ggatcaacgcaaagaaaattggcgaacgaagaagcaaaaaaggcagaaatacaacagctt
atactgcaacatcaatctcgcttaaatgtattaaaaccgaaatatgaactgctgccgcga
cgccgtatgcaggaattggatcttgaattgatacagcaattgattaccttttccaatgaa
attaaaggcttgcaagatcgcgctgaaaaaggccgccattttgtcgtagaagcgaaaaaa
caacaagcgcattataaagcaaaaatccaggaaactgaaagtgagatttcgaatttaaag
cgtgctaaaccttcgccgcatgaattgatggaattgggccgatggtatactaaacaacag
ggtatacaacaacaagaaaaagagcttaataagcaattggtcgatttagaaaacaatgcc
agcgaaatcagacgagaattaaagcatgccgacgtcaacctggaggaatttcaatcaact
catgcccgtgttgttcaccaattggaacaaaaactcaataagctacaggacgaaaaggcc
catctgcttttgcagcagcggctatcccaatatgctaaagatttgaaagaaggatcgcct
tgccccctgtgtggggctattgaacatccaatggtcaaccatgggcaggatatttcgctt
gaaatccttgctcatgaaaaattgatgaccgacacgaccgaactcctaaaactaaaacag
gatcaaaaattccaagtggagaaacttgttcttcgcctgcaatcattgacagatcaaaaa
cacgaactgaacacgaaaattgaattgcataagtcgatagaaatggcccatttcaatgaa
tttgtatggactggctatagcagtacagatgaatcgatctatgcttccaaaaaacaggag
ctttccaaaattgacaccctaatccaggccctcgaaaatcagcttgtaaatgatcagact
gctttagcgtctgtagaggaaaatctggagaaatacaacaaagccttggggcaatttgaa
cgcgacgaagtaagcaagcaagcacagatcaatcaaaatattggcaatttaaaactcctc
agctggttcgattacgaatcgaaagatgcccaaactgtcgaagaagaatataacgcaatc
aaaacctcaaatattacggtagaaaaagagtttgtttcgataaacgataagctaagcgag
ttaaacagtcagttcgcagggcaaaatagtgtggtgaatgccattttggaacgactccaa
acaattgaaagtgaaattctggaagttgacaacacgttgcagcagcatcttttagcttcg
ccgtttaatgcgatcgaggaggttaagcagatactcgcacaaaacttgcctgtacagcag
atccgacttgagctggaacagtttcaaatagatttcgaaactgtaaaggcgcagattgct
caactggaacataagctcgttgaccaagtgtacgaggaaacaatctttattgaacaggaa
aaggcgctgaaagaaagcgctcaacaattgaaagaaagtaccgaaaatgttgccaagctg
aggcaggaactcaaccaattgatgatttcctacgctaaaaaagagacccttctgcagcaa
caaatgaagctaaacttacgtaatgaaaatttgaaacaactcttcaatctatttaaaggt
gccggttttgtacaatatgtttcttcaatttatctacgtcaattgtgcgaccacgccaat
attcgttttcaccgtatgacacgaaatcaactcagtctgcagataaacgaaaacaatgag
tttgagattatagattatttaaatgaagggaagagccgtagtgtaaaaactttatccgga
ggtcaggcttttcaagtatcgctaagcctggcactcgcgctcgccgagagcgtgcagtcg
agtacgaaagcgagcaaaaactttttctttattgatgaaggttttggcacacaagataat
gcgtcaatcaatattgtgtttgaaaccctgttagagctacgccgcgaaaatcgtattgta
gggatcatttctcatgttgaggagctcaaagaaagaattccaatatccctttccatagaa
aaagatgaagaccacggtagtcaaatttttattaattaa
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