Sphingobacterium sp. R2: VXM68_17640
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Entry
VXM68_17640 CDS
T10631
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sprz03009
]
VXM68_17640
Enzymes [BR:
sprz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
VXM68_17640
Ribosome biogenesis [BR:
sprz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VXM68_17640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Peptidase_S24
Motif
Other DBs
NCBI-ProteinID:
XCY04464
LinkDB
All DBs
Position
complement(4256957..4257700)
Genome browser
AA seq
247 aa
AA seq
DB search
MIQNENRLFKFPKFSELIIHEDENLIVINKPPFVASLDEREGGEVNILRLAKKYHPDAQV
CHRLDKETSGILLIAKNPETYRSISIAFEKRRVNKTYHAIIGGTHTFQNLLVDLPILNQG
NKNVSIDRANGKAAETIFNSIKYYKNYTLVECKPITGRMHQIRIHLATQHAAIVGDDMYR
GKPVYLSQIKKRGYTLSKDEEEQPIMKRFALHAKHIEFELNGVKLVFDAPYPKDFATLLK
LLDKFDS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatacaaaatgagaatcgtctatttaaatttcctaaattttcagaattaatcattcat
gaggatgaaaatttgattgttatcaataagccaccgtttgtagcttctttggatgagcgt
gagggcggagaggtgaatatccttcgattggcgaaaaaataccatccggatgcacaggtg
tgccaccgtttggataaagagacttcgggtattttattaattgccaaaaaccccgaaacg
tatcgttcaatttctatcgcatttgaaaaaagaagagtgaataagacttaccatgcgatc
ataggcggtacgcacacttttcagaatttgctggttgatttaccgatcttgaatcagggc
aataaaaatgtatcgattgaccgtgccaatggcaaagcagcggaaactatattcaattcg
atcaaatattacaagaattatacattagtggaatgtaaacccattactggacggatgcac
caaatccgtattcacctagcgacacaacacgcagcaattgttggcgacgatatgtatcgc
ggtaaaccggtctatttatcccaaattaagaagcgtgggtataccttgtcgaaagacgag
gaagaacagcctatcatgaagcgttttgcgctacatgccaaacatatcgaattcgaactg
aatggcgttaagttggttttcgatgcgccctatccaaaggattttgcgaccttattaaag
ctgttagataagtttgattcataa
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