Sphingobacterium sp. R2: VXM68_18730
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Entry
VXM68_18730 CDS
T10631
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00071
Fatty acid degradation
sprz00280
Valine, leucine and isoleucine degradation
sprz00310
Lysine degradation
sprz00362
Benzoate degradation
sprz00380
Tryptophan metabolism
sprz00410
beta-Alanine metabolism
sprz00640
Propanoate metabolism
sprz00650
Butanoate metabolism
sprz00907
Pinene, camphor and geraniol degradation
sprz00930
Caprolactam degradation
sprz01100
Metabolic pathways
sprz01110
Biosynthesis of secondary metabolites
sprz01120
Microbial metabolism in diverse environments
sprz01200
Carbon metabolism
sprz01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VXM68_18730
00650 Butanoate metabolism
VXM68_18730
09103 Lipid metabolism
00071 Fatty acid degradation
VXM68_18730
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VXM68_18730
00310 Lysine degradation
VXM68_18730
00380 Tryptophan metabolism
VXM68_18730
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VXM68_18730
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VXM68_18730
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VXM68_18730
00930 Caprolactam degradation
VXM68_18730
Enzymes [BR:
sprz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VXM68_18730
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VXM68_18730
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VXM68_18730
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
NAD_binding_2
DAO
F420_oxidored
2-Hacid_dh_C
ECH_2
AlaDh_PNT_C
Sacchrp_dh_NADP
RS_preATP-grasp-like
NAD_binding_8
adh_short_C2
ApbA
Motif
Other DBs
NCBI-ProteinID:
XCY04676
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All DBs
Position
4490263..4492383
Genome browser
AA seq
706 aa
AA seq
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MQENKSYITHPLFWVEQDEHHIITITPISTAIAKQPNIVGYLTQFVDLVTLVLETKEIKG
VVYTCPIPDEKIEYIQLFEQFSLDRAAPSELYKLLVKVLRWKTFNIPIVSIFTGNCSAIA
LATMLWSSYRIAPRQIELGFPEAKYGLFTAFGTTIFLPPLIGANDALRLLTQSKLLSSEQ
GHQLGLIDELAYRSDDCLSLAKTSIRYRPHCLDKQRSRHTDEISADAVFNIQRKAHGLYP
GINAVIELLTANFSSSPLEIAAKEAKLYVEVINLPETLSMVRTFHYGVKSAKSSTRITPI
NDYNLKKIGILGAGMMGSGIAYEAARAGIEVVLKDVTLDQAEQGKAYSKRICEKLFALDG
INSSQQQQLLAHIKPSDQVADLDGSDCVIEAVFEDFHLKEQVTQESLPYLHKDGFFATNT
TSLPITELAKACNNPENFIGMHFFSPVDRMPLVEIICGKQTAQKTLEKALTTALRLNKVP
IVVHDGPGFFTSRVFFNYLLEGITMVLEGISPELIEKEAAAAGFAVGPLAVLDEISLELM
VHVYDQLPRLHTSQKRAYNYLRMLVDQGRKGKKWGAGFYDYPSENKNKTIWNNPKISSLK
ENIKPATIHKRLLHVMALDSYRCLEEGILDQPIDGDIGAILGVGYASYTGGVFSHIDRTT
LPLFVAECQVFQPLGDQWDIPESLKKLADKNFRFYHGFESNWHRIS
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagaacaaatcttatattacacatccactcttttgggtagaacaggacgaacat
catatcataacaataacccctatttcaacagcaatagccaagcagccgaatattgtaggt
tatctcacacaatttgttgacctggtcacgcttgttctcgaaacaaaagaaatcaaaggg
gtggtgtatacttgccctattccagatgagaaaatcgaatatattcagttatttgagcaa
ttttcactggaccgtgcagctccctcggaattatacaagcttcttgtaaaggtattgcgc
tggaaaacgtttaatatacctattgtttccatctttactggtaattgttcagctatagca
ctagcaactatgctatggtccagctatcgaattgcaccaagacaaatcgaattaggcttt
ccggaagctaaatacgggctgtttacagcttttggtacaaccatcttcttaccaccattg
atcggtgccaacgatgcgctccgcttgctgacccaaagcaaacttttaagtagtgagcaa
ggccaccaactgggattgatagacgaattagcgtatcgctccgatgactgcctatcatta
gccaaaacctcaatccggtatagacctcattgtttggataaacaaagaagtcggcatacc
gacgaaatatcagccgatgcagtctttaatattcaaagaaaggcacatggcttgtatccc
ggcataaacgctgttatcgagttattaacagcaaacttttcatccagccctcttgaaatt
gccgcgaaggaagcaaagttgtacgtggaagtcatcaatcttcccgagacactgagtatg
gtccgcacattccattatggcgtaaaatcagccaaatcgtccacgaggatcacacctatt
aacgactacaacctaaagaaaattggcatattgggtgccggtatgatgggatctggtata
gcttatgaagctgcacgagcgggaattgaggtcgttttaaaagatgttacactcgaccaa
gctgaacagggcaaagcctattcgaagcggatttgcgaaaaactattcgctttagatgga
atcaactcctcacagcaacaacaattacttgctcatatcaaacccagcgaccaagtggca
gatcttgatggatctgattgtgttatcgaagcggtatttgaagatttccatcttaaagag
caagtaacacaagaaagcttaccctatttgcacaaagatggtttcttcgccacaaatacc
acgtcattgcccattacggagctagcaaaagcatgcaacaatcccgagaattttatcggt
atgcatttcttttctccggtagatcgcatgccccttgtcgaaattatctgcggtaagcaa
accgcgcaaaaaacattggaaaaagcacttactacagctttgcgcctcaataaagttcca
atagtcgtgcatgatggccctggcttctttacctcacgcgttttcttcaactatttactc
gaaggtattaccatggttctggagggtatatcaccggagttgatcgagaaagaagcggcg
gcagcaggatttgcagtggggcccttggcagtattggatgaaatttccctggaactgatg
gtacatgtttatgatcaattaccgcggctgcacaccagccagaagcgtgcatataattac
ctgcgaatgctagtcgatcagggaagaaaaggaaaaaaatggggagcaggattctacgat
tacccgagtgaaaacaaaaacaaaacgatttggaataatcccaaaatttcatctctaaag
gaaaatataaagcctgcaacgatccataagcgtttgttgcatgttatggcattagatagt
tatcgatgcctcgaggaaggcatactcgatcaacccattgacggtgacatcggcgctatt
ttaggcgtaggttatgcctcttataccggtggggtatttagccacatcgaccgcacaacg
cttccgcttttcgtggccgaatgtcaggtatttcagccccttggcgatcaatgggacatc
cccgaatctttaaaaaagctggcggataagaattttagattttatcatggtttcgagtca
aactggcaccgtatcagttaa
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