Sphingobacterium sp. R2: VXM68_20615
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Entry
VXM68_20615 CDS
T10631
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_20615
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_20615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
Motif
Other DBs
NCBI-ProteinID:
XCY05044
LinkDB
All DBs
Position
complement(4940177..4941784)
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AA seq
535 aa
AA seq
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MMNRHYIKLVAAALLLQFSSCKPNLDLSNPQELSTDTYYKTADQLENSVIPAYQALIGRT
QGGYARSLYFELLAPGDDYNHTFKWEPMYQDSYNTPASDGMTAQTWRDFWNGVFAANLAI
DRIQKFEGEIEQNRKNRLLGEAYFLRGLNYLHLGMLFGETIPLMSKPVETNEDYYPGNAP
AGAVYAQIVDDFKKASELLPARAALYADSKMIGRATKGAAQAYLAKTYLYKPILAKGQAA
DFANAEIQLKSVIDSKEYQLMSSYRDNFLETKENNQESIFEVQLYNGPGWLGDDISSSWR
WQEIGMFDGTGGAWWNLAPNKMAHDQFEDGDPRKFMTLWCENGANFTQLDGKVTTYTDWM
KNLATNKDLYGTRKYCPDVQIADFDNGNNDRIFRYSDVLLLYAECLNERGDVTGAKQYIN
LVRMRANNIVPDEQPHLWYQKSKGTIPDVDGLLAQGLVKNGVSLNTVKNIIVHERFVEFL
GEYQRYFDLLRWGMADPVWLEPLKKGGWSPKAMYYPFPQAELDNNKNLKGNEMNN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatagacactatataaagcttgttgctgctgctctgctgttacagttttcgagt
tgtaaaccaaatttggatctatccaatcctcaggaattgtcgacagatacttattataag
acggcagatcaattggaaaattccgttatacccgcataccaggcgctgattgggcgtacg
cagggtggatatgctcgtagtttgtattttgagcttttggctcctggggatgattacaac
cacacgtttaagtgggagcctatgtatcaggatagctacaatacgcctgcgagcgatgga
atgacagcgcagacctggagagatttttggaacggggtatttgcggctaatttagctatt
gaccgtattcagaaatttgagggcgaaatagaacaaaatagaaaaaatagattgttgggg
gaagcgtattttctgcgaggtttgaattatctgcatctgggcatgttgtttggtgaaacc
attccactaatgagtaaacctgttgaaacaaatgaagattattatccgggcaatgcaccg
gcgggcgccgtttatgcgcagatcgtggatgatttcaagaaagcatcggaattgttgcca
gcacgggcagcactttatgctgacagcaaaatgatcggtagggcgacaaaaggtgctgca
caggcttatctcgccaaaacctacctttataaacccattttggctaaaggacaggcggcg
gattttgcaaatgctgagattcaattaaaaagtgttattgatagtaaggagtaccagttg
atgtcctcttacagggataatttcttggagacaaaagagaataatcaggagtctattttt
gaagtccagctttataatggtccgggctggctaggtgacgatatatcgagttcgtggcga
tggcaggaaatcggcatgtttgacggtactggcggcgcttggtggaatctcgcgcccaat
aaaatggcgcatgatcaatttgaagatggcgatcctagaaagtttatgactttatggtgt
gagaatggtgcgaattttacgcaattggatggtaaggtcaccacttatacggactggatg
aagaatttggcgacgaataaggatctatatggtacaagaaaatattgtcctgacgtgcaa
atagcggactttgataacggtaataacgaccgcatttttcggtacagtgatgtgctgctt
ctttatgcggagtgcctcaacgaacggggggatgtaactggagccaagcaatacatcaat
ctggttaggatgcgtgccaataatatcgttcccgatgaacagccgcatctttggtatcaa
aaatcgaaaggaacgattcctgacgtagacggattgcttgcgcaaggtttagtaaaaaac
ggtgtttcattaaataccgtcaaaaatattatcgttcatgagcgatttgtcgaattcctt
ggtgaatatcaacggtattttgatttgttgcggtggggaatggctgatcctgtctggttg
gagccgttgaagaaagggggctggtcgccaaaagccatgtattatcctttccctcaagct
gaactggataataataaaaatttaaaaggtaatgagatgaacaattga
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