Sphingobacterium sp. R2: VXM68_21930
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Entry
VXM68_21930 CDS
T10631
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_21930
Transporters [BR:
sprz02000
]
Other transporters
Pores ion channels [TC:
1
]
VXM68_21930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
SdrD_B
DUF3869
SpaA
Motif
Other DBs
NCBI-ProteinID:
XCY05302
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Position
5276200..5278494
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AA seq
764 aa
AA seq
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MKLKIIGCIFMLVSYCSILPALASTISGKVTDAKTNLPIAGATISLQQLRSSTASDQQGR
YSFKSLPASGRYLVEVRFLGYQSVVKAVDLTSENLSLDFSLTESIIETNEVVVTGTLVTS
QSRRNSTSVAVISKDELQGNGTNLIDALARQVPGLSQITTGQGISKPIIRGLGYNRVVTV
SDGVKQMGQQWGDEHGIEIDQNQPDRVEILRGAASLMYGSDAIGGVINVLEPNVPTEGHI
KGELLTSYATNNGLTNSSVMLTGNENGFVWRGRGSYQNAYSYNTPAGRYGNSGFNNSNLS
GMLGLNKQWGYSHLNFSYLKNNIGFYDAEPGDPLYTNAKSRTLDFPKQDIRHYKLALNNS
FVVGSGNLKLDLGYQKNQRRELEEATPSLFFDLNTYSLDAKYSLSERNGWQHVFGISASQ
EHSVNKGTEFLIPAYDQLELGAFGYAKKSWGENTFNVGLRYDYVNNKGKQLFVEDEEQFP
GFKNSVSNVSGALGYTHIFNEDLNFKANAGSAFRAPNPAELGSNGVHEGTSRYEVGNENL
KPERSYQADATLEFGHSIVTGSIGIYENYIHNFIYASATKGDTKTVVGEDGDSHTYDVYR
YGQVNANLYGVEGSLNFHLLNWIHLDNTFSYTHAQNTTFDRPLALIPAGVVHNTLRLEPK
VSGLNAFYLSVGLDNYFKQNRIDETFETPANGYTLLNAGIGTTLHFGQQQLEIFAAASNL
TNKRYYDALSRLRPGRLSQEDPNFGVYNMGRNITFGVYLPLNIK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaaaattataggctgcatttttatgcttgtctcctattgctccatacttccg
gcgcttgcctcaacaattagcggtaaagtaacggatgccaaaaccaacctaccaattgct
ggtgctaccatatcactgcagcagcttcgttcgagcacggcatcagaccaacaaggtcgt
tatagctttaaatctcttcctgcaagtggacgctacttggttgaggtccgttttttgggt
tatcaatccgttgtcaaggccgtagatttaacttcggaaaatctttcccttgatttttcc
ttgacagaaagtattattgaaacgaatgaagtagtcgttacaggtacactggtcacttct
cagagccgtcgcaacagcacctcagtagctgttatttccaaagatgagttgcagggaaat
ggaacaaatcttattgatgcactcgcccggcaagttcccggactaagtcagatcacaacg
ggacaaggaatttcaaagcctattataaggggtctggggtataatcgtgtcgtcacggta
agcgatggggtaaaacagatgggacagcaatggggcgacgaacatggcattgaaatagac
caaaatcaacccgaccgtgtcgagattttacgtggtgcagcttcattgatgtacggatct
gatgccatcggtggtgtgatcaatgtactggaacctaatgttcctactgaggggcatatt
aaaggtgaattactgacaagctatgcgaccaacaatggactgaccaatagttcggttatg
ttaactggtaatgaaaatggcttcgtatggcgtggccgtggatcgtatcagaatgcgtat
tcttataatacccctgcaggaagatacggcaatagcggctttaacaacagcaatttaagc
ggtatgctcgggctaaacaagcaatggggctattcgcaccttaatttttcttacctaaaa
aataacatcggcttttacgatgccgaaccgggtgacccgctgtacacaaacgctaaaagc
cgtacattggattttcccaaacaggacatccgtcactataaattggccctcaacaacagc
ttcgttgtcggatcgggaaatttaaaacttgacttaggctaccaaaagaatcaacgtcga
gaattagaagaagcgaccccatccctgttctttgacctcaacacctattccctcgatgcc
aagtattctttaagtgaaagaaacggctggcaacatgtatttggtattagtgccagtcag
gaacacagtgtaaataaagggaccgagttcttaatcccagcctatgaccagctggaattg
ggagcttttggttatgcgaagaaaagctggggcgaaaacacgtttaatgtcggtttacgc
tatgactatgtcaacaacaaaggcaaacagctgtttgttgaagatgaagagcaatttcct
ggttttaaaaatagcgtcagtaatgtcagtggtgcccttggttatacgcatattttcaat
gaggatctcaattttaaagcaaatgcgggctcagcatttagagcacccaaccccgcagag
cttggctccaatggtgttcatgagggtacttcgcggtatgaagtcggtaatgagaaccta
aaacccgaaagaagttatcaagcagatgcgacactggagtttggccatagtatcgttacc
ggaagtatcggaatctacgaaaattatattcacaactttatatatgcctcggcaacaaaa
ggggatacaaaaactgtggttggcgaagatggcgattctcatacctatgacgtataccgt
tatggacaggtcaatgccaatctatatggtgttgaaggaagcttgaattttcatttgttg
aactggattcacctagacaacacgtttagttatacgcatgcacagaatacaacctttgac
agaccattggcattgattccagctggcgttgtgcacaatacgctgcgccttgaacctaaa
gtaagcggattaaatgccttctacttatctgtggggctagacaattattttaaacagaat
cgcattgacgaaaccttcgaaacgccagcaaacggatacacattgttgaatgctggaatc
ggcacgacattgcacttcgggcagcagcaactggaaatatttgcagcggcatccaatctg
accaacaagcgttattacgatgccttaagccgattgcgcccgggtaggctatcgcaagaa
gatcctaattttggcgtctacaatatgggcagaaacatcacattcggtgtctatctaccg
cttaacatcaaataa
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