Streptococcus pyogenes SSI-1 (serotype M3): SPs1213
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Entry
SPs1213 CDS
T00119
Name
(GenBank) putative single strand DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sps
Streptococcus pyogenes SSI-1 (serotype M3)
Pathway
sps03410
Base excision repair
sps03430
Mismatch repair
sps03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SPs1213
03430 Mismatch repair
SPs1213
03440 Homologous recombination
SPs1213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sps03400
]
SPs1213
DNA repair and recombination proteins [BR:
sps03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SPs1213
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SPs1213
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SPs1213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
Glyco_transf_52
Motif
Other DBs
NCBI-ProteinID:
BAC64308
LinkDB
All DBs
Position
complement(1194676..1196886)
Genome browser
AA seq
736 aa
AA seq
DB search
MIKSKYSWKIKDKKPDDGFFKLAKTKGLTQTAAQLIYERGIRTEEALDEFLTADLSQLHD
PYLLHDVAKAVPRIRQAIEEGERILIYGDYDADGMTSASIVKETLDMMGAEPLVYLPNRF
TDGYGPNQSVYKYFIEQEAVSLIITVDNGVAGHEAIRYAQEQEVDVIVTDHHSLPEELPE
AFAIIHPEHPDADYPFKHLAGCGVAFKLATALLESLPTDCLDLVAIGTIADMVSLTGENR
VLVKNGLAMLKHTERVGLQELMSLSPIDLEHFNEDAIGFQIAPQLNALGRLDDPNPAIEL
LTGFDDQEAQAIALMIKKKNEERKALVQDIFDQAMAMVDPQKPVQVLAQAGWHPGVLGIV
AGRIMETIGQTVVVLTIDNGFAKGSARSLEAINIFEALNGKRELFTAFGGHAGAAGMTLP
VDNLEALSDFLCQFVIERGLDQTAKNTLTIDERLSLDDLSLDILKSLDKLAPYGMDHQKP
VFYVKDIRVSQARTIGQDQSHLKFKVSQGKASFDVLAFGQGSQLQEFRQATGLELAVTLS
VNHWNGNTSLQFMLVDARVDGVQLLDLRTKTAKVPEGIPTIEEDPNARVILINDIPEDFK
TWRNQFVHKDFDAIYFKNQMKHPYYLTGFGSREQFAKLYKTIYQFPEFDLRHKLTELSHY
LNIEKLLLIKLIQIFEELSFVTIDDGLMTVNPQAQKREISESHIYQDLKELVKFQEIMAL
ASPKEMYDYLVKSNDQ
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatccaaatatagctggaaaataaaagacaagaagccagatgatggcttcttt
aagctagcaaagacaaaaggtctaacccagaccgccgctcagttgatttatgagcgaggg
ataaggactgaagaagccttagatgagtttttaacagcggacttgtctcaactgcatgat
ccttacttgctacatgacgtggcaaaagctgtgccaagaattcgtcaagctattgaagag
ggcgaacgaattctcatttacggcgactatgatgctgatggcatgacgtcggcttctatt
gttaaagaaaccctagacatgatgggagcagagcctttggtttatcttcccaaccgcttt
acagatggctatggccccaaccagagcgtctataaatattttattgagcaggaagctgtg
tccctaattatcacggttgataatggcgtggccggacatgaagcgattagatatgctcaa
gaacaggaagttgatgtcattgtaactgaccatcatagcctgcctgaagaattgccagaa
gcctttgccatcattcatcctgagcatcctgatgctgattatccctttaaacacttagct
ggctgtggcgttgcctttaaattggcaacagctttgctagaaagtttaccaacagactgt
ctagacttggtagctattggaaccattgccgatatggtaagcttgacaggtgaaaaccgt
gttttagtcaaaaatggtctggccatgctcaaacacaccgaaagagtgggcttgcaggag
ttgatgtccttgtctcctattgatttggaacattttaatgaagacgccattggctttcag
attgctccgcaattaaatgctttagggcgcttagatgaccctaatccagccattgagcta
ctgacgggctttgatgaccaagaagctcaagcgattgccttgatgattaagaagaaaaat
gaagagcgtaaggccttagtccaagacatttttgatcaagcgatggctatggttgatcct
caaaaacctgttcaagtcttggcacaagctggctggcatcctggtgttcttgggattgtc
gctggtcgtatcatggaaactattggacaaacggtcgtcgttttgaccattgataatggc
tttgcaaaaggctcggccagaagtttagaagctattaatatttttgaagccttaaatggc
aagcgtgagttatttacagcctttgggggacatgctggtgcagcaggaatgaccctgccc
gttgacaacttggaagctctctcagactttctttgtcagtttgtgatagaacgtggctta
gatcagactgccaaaaatacgttaactattgatgaaagactgtctttggacgaccttagc
cttgatattttaaagagtttagataaattagccccttatgggatggatcatcaaaagccg
gtcttttatgtcaaggacataagggttagtcaagcgcgtaccatagggcaagaccagagc
catcttaaatttaaagtcagtcagggcaaagcttcctttgacgtactggcttttggtcaa
ggaagtcaactgcaagagttccgacaagctactggtttagaattagcagttaccttatct
gtcaaccattggaatgggaacacgagtctccaattcatgttagtagatgctcgtgttgac
ggagtgcaacttcttgacttaaggacaaaaacagccaaagttcctgaaggtattccgact
attgaagaagacccaaatgccagagtcattctgattaatgacatccctgaagatttcaaa
acctggcgcaaccagtttgttcacaaggattttgacgccatctattttaaaaatcagatg
aaacatccttattatttaacaggatttggcagcagagagcagtttgccaagctctacaaa
accatctatcagtttcctgaatttgatttacggcataaattgacagagttgagtcactat
ttaaacatagaaaaacttttactgattaagttgattcaaatttttgaagagttgtctttt
gtgacgattgacgatgggctgatgacggttaacccccaagcgcaaaaacgagagatttca
gagagccacatttaccaagacttaaaagaattggtgaaatttcaagaaatcatggctttg
gctagcccgaaagagatgtatgattatttggtgaaatcaaacgatcaataa
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