Streptococcus pyogenes SSI-1 (serotype M3): SPs1340
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Entry
SPs1340 CDS
T00119
Name
(GenBank) putative ATP-dependent exonuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sps
Streptococcus pyogenes SSI-1 (serotype M3)
Brite
KEGG Orthology (KO) [BR:
sps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sps03400
]
SPs1340
Enzymes [BR:
sps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SPs1340
DNA repair and recombination proteins [BR:
sps03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SPs1340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_19
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-ProteinID:
BAC64435
UniProt:
P0CZ53
LinkDB
All DBs
Position
complement(1327201..1330662)
Genome browser
AA seq
1153 aa
AA seq
DB search
MVERILDKILRGVSIDRLFISTFTVKAATELRERIENKLYSQIAQTTDFQMKVYLTEQLQ
SLCQADIGTMDAFAQKVVSRYGYSIGISSQFRIMQDKAEQDVLKQEVFSKLFSEFMNQKE
APAFRALVKNFSGNCKDTSAFRELVYTCYSFSQSTENPKIWLQENFLSAAKTYQRLEDIP
DHDIELLLLAMQDTANQLRDVTDMEDYGQLTKAGSRSAKYTKHLTIIEKLSDWVRDFKCL
YGKAGLDRLIRDVTDLIPSGNDVTVSKVKYPVFKTLHQKLKQFRHLETILMYQKDCFPLL
EQLQDFVFAFSEAYLAVKIQESAFEFSDIAHFAIKILEENTDIRQSYQQHYHEVMVDEYQ
DNNHMQERLLTLLSNGHNRFMVGDIKQSIYRFRQADPQIFNQKFRDYQKKPEQGKVILLK
ENFRSQSEVLNVSNAVFSHLMDESVGDVLYDEQHQLIAGSHAQTVPYLDRRAQLLLYNSD
KDDGNAPSDSEGISFSEVTIVAKEIIKLHNDKGVPFEDITLLVSSRTRNDIISHTFNQYG
IPIVTDGGQQNYLKSVEVMVMLDTLRTINNPRNDYALVALLRSPMFAFDEDDLARIALQK
DNELDKDCLYDKMQRAVIGRGAHPELIHDTLLGKLNVFLKTLKSWRRYAKLGSLYDLIWK
IFNDRFYFDFVASQAKAEQAQANLYALALRANQFEKSGYKGLYRFIKMIDKVLETQNDLA
DVEVAAPKQAVNLMTIHKSKGLQFPYVFILNCDKRFSMTDIHKSFILNRQHGIGIKYLAD
IKGLLGETTLNSVKVSMETLPYQLNKQELRLATLSEQMRLLYVAMTRAEKKVYFIGKASK
SKSQEITDPKKLGKLLPLALREQLLTFQDWLLAIADIFSTEDLYFDVRFIEDSDLTQESV
GRLQTPQLLNPDDLKDNRQSETIARALDMLEAVSQLNANYEAAIHLPTVRTPSQLKAAYE
PLLEPIGVDIIEKSSRSLSDFTLPHFSKKAKVEASHIGSALHQLMQVLPLSKPINQQTLL
DALRGIDSNEEVKTALDLKKIESFFCDTSLGQFFQTYQKHLYREAPFAILKVDPISQEEY
VLRGIIDAYFLFDDHIVLVDYKTDKYKQPIELKKRYQQQLELYAEALTQTYKLPVTKRYL
VLMGGGKPEIVEV
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaacgcatacttgataaaattttgagaggtgtttcaattgatcggctttttatc
tcaacctttactgttaaagcagctacagaactgcgtgaacggattgaaaacaaattatac
tcacaaattgctcaaactacagattttcaaatgaaagtttatttaacagaacaattgcaa
tctctttgtcaagctgatattggtactatggatgcttttgcacagaaagtagtaagtcgc
tatggttatagcattggcatttcatcccaatttcgtatcatgcaggataaagcagaacaa
gatgttttaaagcaagaggtgtttagcaaactctttagtgagtttatgaatcaaaaagag
gcaccggcgtttagggctcttgtgaaaaatttttctggtaactgtaaagacacttcagct
tttagagagttagtttatacttgttattcttttagccaatcgacagaaaatccaaaaata
tggttgcaagaaaattttctaagcgctgctaaaacttaccaaagacttgaagatatcccg
gatcatgatattgaactcttacttttggcaatgcaagacactgcaaatcagctaagagat
gtgactgatatggaagattatgggcagctgactaaggcaggtagccgatctgctaaatac
actaaacacttaacgatcatagaaaagttgtctgattgggtgcgtgattttaaatgtttg
tatggaaaagccggattggatcggttgatcagagatgtgacagaccttataccatctggg
aatgatgttacagtctcgaaggtaaaataccctgtttttaagaccttgcatcaaaaatta
aaacaatttaggcatttagaaacaattttaatgtatcagaaagactgttttcccttattg
gaacagttacaagattttgtgtttgcgttttcagaagcttatttagctgtcaaaatacaa
gaaagtgcttttgaattttcagatattgcacactttgcaatcaaaattttagaggaaaat
acggatattcgccaatcctatcagcaacactatcatgaggtgatggttgatgaatatcaa
gataacaatcatatgcaagagcgactcctgaccttactatcgaacggtcataatcgcttt
atggtaggagatatcaaacaatcgatctatcgatttcggcaagccgatcctcagattttt
aatcaaaagtttagagactatcaaaaaaaacctgagcaggggaaagtgattttactcaaa
gaaaactttcgtagccaatcagaggtgttaaatgtcagcaatgctgtttttagtcactta
atggacgaatcagtaggagacgtcttatacgatgagcaacatcagttaatagcaggtagt
catgctcaaacagtcccctatctagaccgtcgtgctcagttattgctatataatagcgat
aaagatgatggcaacgccccttcagatagtgagggtatttcatttagcgaggttacaatt
gttgccaaagaaattattaagcttcacaatgataagggtgtcccttttgaagatattacg
ttactcgtttcttcaagaacaagaaatgatatcatttctcatacattcaatcaatatggt
attcctatagtaacagatggtgggcagcaaaactatcttaaatctgttgaagtgatggtt
atgttagatacattacgcaccattaataacccaagaaatgattatgcccttgtggcttta
ctgcgctcaccgatgtttgcctttgatgaggatgatttagcaagaatagcacttcaaaaa
gacaatgagctagataaagattgcctatatgacaagatgcaaagggctgtgattggaaga
ggtgctcatcctgaattgattcacgataccttgcttggcaagttaaatgtttttttaaag
acgttgaaaagctggcgtcgatacgctaagctagggtcgttgtatgacttgatttggaaa
attttcaatgatcgtttttattttgattttgtagctagtcaagcaaaagcagaacaagca
caagctaatctatacgcattagctctacgtgctaatcagtttgaaaaatcgggctataaa
gggctataccgttttattaaaatgattgataaggtacttgagacgcaaaatgacttagca
gatgtggaagtggctgctcctaaacaagctgttaatttaatgaccattcacaagtctaaa
ggtttacaatttccgtatgtatttatccttaattgtgacaagcgcttctcaatgacagat
attcataaatcatttattctgaatcggcagcacggtatcggtatcaagtaccttgcagat
atcaaaggtttacttggtgaaacaacactcaattctgttaaagtaagcatggaaacctta
ccttatcaattgaacaaacaagagttgcgcttagcaactttatcagaacaaatgcgctta
ctgtatgttgctatgacacgagctgaaaaaaaagtttattttattggtaaagctagtaag
agcaaaagtcaagaaatcacagatcctaaaaagttaggcaaacttttgccgctggcttta
cgagaacagttattgacattccaagattggctattagcaatagcagatatattttcaact
gaagatctttattttgatgttcgctttattgaagatagtgatttgacacaagagtcagtc
ggacgacttcaaacaccacagttattaaatccagatgatcttaaagataatcgtcaatca
gaaacaattgcacgggctttagatatgttagaagcagtgtctcaattgaatgccaattat
gaagcagctattcatttgccaacagttcgaacgcctagccaacttaaggcagcttacgag
cctttattagaacccattggtgtagatattatagagaaatcttctcgatcgctatctgat
tttactttgccacatttttcaaaaaaagcaaaagttgaagcaagtcatattggatcagct
cttcatcagttgatgcaggtgctccctttgtcaaaaccgataaatcaacaaacgctttta
gacgctttaagaggaattgatagtaacgaagaggtaaaaacagctcttgatctcaaaaaa
atagagtcgttcttttgtgatacaagcctaggccaattttttcagacttaccaaaaacac
ttgtatcgagaagcaccatttgctattttaaaagttgaccctattagtcaagaagaatat
gtcctacgtggtattatagatgcctactttttgtttgatgatcatattgtattagtggac
tataaaacagataaatacaagcagcccattgagttaaaaaagcgttaccaacaacagttg
gagttatatgcagaagctctcactcaaacgtataaacttcctgtgactaagcgctatctt
gttttaatgggaggtggaaagccagaaattgtcgaagtttaa
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integrated database retrieval system
