Sphingobacterium psychroaquaticum: E2P86_00265
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Entry
E2P86_00265 CDS
T05967
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc03030
DNA replication
spsc03410
Base excision repair
spsc03420
Nucleotide excision repair
spsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2P86_00265 (polA)
03410 Base excision repair
E2P86_00265 (polA)
03420 Nucleotide excision repair
E2P86_00265 (polA)
03440 Homologous recombination
E2P86_00265 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsc03032
]
E2P86_00265 (polA)
03400 DNA repair and recombination proteins [BR:
spsc03400
]
E2P86_00265 (polA)
Enzymes [BR:
spsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2P86_00265 (polA)
DNA replication proteins [BR:
spsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
E2P86_00265 (polA)
DNA repair and recombination proteins [BR:
spsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
E2P86_00265 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E2P86_00265 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
DUF3913
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
QBQ39673
LinkDB
All DBs
Position
complement(54003..56798)
Genome browser
AA seq
931 aa
AA seq
DB search
MKKLFLLDGMALIYRAYFALSKVPRLTSYGLNTGAIMGFTNTLLELLNKQKPTHIAVVFD
TSAPTNRHLEFPEYKAHREKMPEDLSASIPYIFRLIEGFNIPIITMDGYEADDIIGTLAK
KAEKEGFDVYCMTPDKDFGQLVSDHIFIYKPARMGNGAETLGVPEILEKWEITEVSQVID
ILGLWGDAVDNIPGIPGIGEKTAKKLIQEYHSVEGIIENSHQLKGKLKENVENYAEQGRI
SKKLATIQLDVPIELDEKALELEKPDRERLEPLFADLEFRTLGKRVFGDDFNIVESASAP
TSGQMDLFASAASSTDSSPDPVVPVVPSLNINNTPHNYILVNTAEDQQKLAEKLATLQSF
CFDTESTSVEALEAEIVGLSFSWEKGKAYYVPTPSDREEAENIVSLFKPVLENATIEKIG
QNIKYDILLLSRYGVRVQGPLFDTMIAHYLIDPDTRHGMDVLAEIYLGYTPVSITELIGP
RGKNQLTMRDVEITKVTEYAAEDADITWQLHEIFKPLLIETQTLELAEKVEFPLVYVLAD
IERNGVKIDVDTLKVFSKSLEEDVKRLEQTIYEKTGVTFNIASPKQLGEVLFDKLQLDPK
AKKTKTGQYKTGEDVLLALANKSDIVQDILDFRQLQKLKSTYVDALPGLINKETGLIHTS
YNQAVAATGRLSSTNPNLQNIPIRTEKGREVRKAFIPRSTGNVLLSADYSQIELRLIAEL
SQDKNMLEAFAAGHDIHRATAARVYGVPLEEVTSDQRRNAKAVNFGIIYGQSAFGLSQNL
GISRKDASDIIDQYFSQYTGIRQYMTSTIESAKEKGYVETILKRRRYLRDINSANMTVRG
FAERNAINAPIQGSAADLIKIAMIDIQDDIINSSLKGKMIMQVHDELVFDVPQEEADRFK
TIIIDRMKNAIKLQVPIEVEVGLGSNWLEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaactatttctccttgatggaatggcgctcatctatagagcctatttcgcttta
agtaaagttcctcgtttaacctcctacggtttaaacactggggcgatcatgggttttacc
aatacgttgctggagctattaaacaaacaaaagcccacacatatcgctgtcgtttttgat
acgtccgcaccaacgaatcgtcacctagaattcccggaatataaagcgcatcgcgaaaaa
atgccagaagacctatcggcttctatcccttatatctttagactaattgaaggatttaat
attcctatcataacgatggacgggtatgaggccgatgacattatcggaacccttgcgaaa
aaagcggaaaaggaagggtttgatgtgtattgtatgacccctgacaaggattttggtcaa
ttggtgtctgatcatatttttatttacaaaccggcgcgtatgggtaacggcgccgaaacg
cttggtgttccagagatcttagaaaaatgggaaatcaccgaggtttcccaagtaattgat
attttaggcctttggggtgacgctgttgacaatatccctggtattcctggaattggtgag
aaaacggcaaaaaaactaatccaagaatatcattccgttgaaggtataatcgaaaattca
caccagcttaaaggcaagctcaaagaaaatgttgagaactacgccgagcaaggtcgtatc
tctaaaaaactagcaacgatccagttggacgttcccattgaattggacgaaaaagctctt
gagttggagaaaccagaccgagaacgcttggagccgctctttgcggacctggaatttcga
acactgggcaaacgtgtctttggagatgactttaacattgtggaaagtgcaagcgcacct
acctcgggccagatggatctttttgcgagcgcagcctcgtcaaccgacagttccccggat
cccgtcgttccagttgttccaagcttaaacataaacaataccccgcacaactatatattg
gtaaacacggccgaagatcaacaaaagctggccgagaagttggctacccttcaaagcttt
tgtttcgataccgaatcgacatctgtagaggcactagaggcggagattgtcggtttatct
ttttcatgggaaaagggcaaagcatattatgtaccaacaccgagtgaccgtgaagaagct
gaaaacattgtgtctctctttaagcctgtgcttgaaaatgctacgatagagaaaatcggc
cagaatattaaatatgatattctattgctatcgcgctatggtgtgcgtgttcaaggacct
ttgttcgacaccatgatcgcgcattacctcattgatcctgacacaagacacgggatggat
gtcctggcagaaatctacttaggatatacccccgtctccatcacagaattgattggacca
cgcggtaaaaatcagctgaccatgcgtgatgttgaaattaccaaagtaacggagtatgcg
gcagaagatgccgatatcacgtggcagctccacgaaatatttaagcccttactgattgaa
acgcaaacactggaactcgcggaaaaggtcgaatttccactcgtgtatgtattggctgat
atagagagaaatggtgtgaagatcgatgtcgacaccctaaaagtcttctccaaaagctta
gaagaggacgtcaaacgattggaacaaaccatctatgagaaaacgggtgttacattcaat
attgcttcaccgaaacaactgggggaagttcttttcgacaaattacagttagacccgaaa
gcaaagaaaacaaaaacgggccaatataaaaccggagaggatgtgcttttggccttagcc
aataaatctgacattgtacaagatatccttgatttccgtcagttacagaagttaaagtcg
acctatgttgacgcactcccaggtttaataaacaaagaaactggactgattcatacatcc
tataaccaagcggtcgcagccacaggaaggttaagttccacaaatccgaacttacagaac
attcccattcgaacggaaaaaggacgcgaagtgcgaaaagcgtttattcctcggtctacc
ggaaatgttctattatctgccgactactcgcagatcgagctgcgtttaattgcagagctt
agtcaggataaaaatatgctggaagcctttgctgcaggacacgatattcaccgtgccaca
gccgcacgtgtttatggtgttccgctagaggaagtaacatctgaccaacgtcgaaatgcg
aaagccgtgaattttggaattatctacggtcaatcagctttcggtctttcacagaaccta
ggaatctccagaaaagacgcatccgatattatcgaccaatattttagtcaatataccggc
atccgtcagtatatgacaagtacaatagaatcggctaaggagaagggttacgttgaaaca
attttaaagcgtcgccgttatttaagagacattaattcggcaaatatgacggtacgtggc
tttgcggaacgaaatgcgatcaatgcgcccattcaaggctctgcagcagatttaataaaa
attgcgatgatcgatatccaagacgatattatcaatagctccctaaaagggaaaatgatc
atgcaggttcatgatgaacttgtttttgatgttccacaagaggaagcggaccgttttaag
acgatcatcattgatcgcatgaagaatgcgatcaagctacaagtacccatcgaagttgaa
gtaggactaggtagtaattggttagaagctcattaa
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