Sphingobacterium psychroaquaticum: E2P86_00960
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Entry
E2P86_00960 CDS
T05967
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E2P86_00960 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsc03400
]
E2P86_00960 (recO)
DNA repair and recombination proteins [BR:
spsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E2P86_00960 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
E2P86_00960 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF7054
Motif
Other DBs
NCBI-ProteinID:
QBQ39797
LinkDB
All DBs
Position
complement(222154..222879)
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AA seq
241 aa
AA seq
DB search
MLHKTKGIALKTTSYSENSIIVHIYTEQFGMQSYIINGAKKPKAKIHANLFQPLHPLEMV
VYHKDNGGLQHIKEAQHAPILKQIPLDIIKSSLALFLNEVLYKALKSQSPDPFLFHYIQQ
SIHWLDQTEDNLANFHLVFLIKISRFLGFLPLQTSGKQLPYFDLMDGIFTTNLPAHTHVL
QAPHTEILYRLLQMTFEQSSSLKMEKEDRKFLLEKLLEFYKLHTENFGTVHALYILEEIF
Q
NT seq
726 nt
NT seq
+upstream
nt +downstream
nt
atgctccataaaacaaaaggaattgccctaaagacgacaagctattcagaaaacagcatt
atagtacatatatatacagagcaattcggtatgcaatcatacattattaatggagcaaag
aaaccgaaagccaagatccatgcaaacctgtttcaacccttacacccgcttgagatggtg
gtctatcacaaagataatggggggttacaacatatcaaagaagcgcaacacgcccctatc
ctaaaacagataccattggacattataaaaagttcgctggccttgtttctcaatgaagta
ttatataaagctttaaaatcacaatctcctgacccttttctttttcattatatacaacaa
tcgatccactggcttgatcaaacggaagacaacctcgcaaacttccacctcgtatttctt
atcaagatcagtcgtttcttgggtttcctaccgctgcaaacctccggaaaacaactccca
tactttgaccttatggacggcatattcacaacaaacctaccggcccatacgcatgtttta
caagcaccgcacaccgaaatcctataccgtctcttacaaatgactttcgaacaatcttct
tccttaaaaatggagaaagaagaccgtaagttcctgctggaaaagttgcttgaattttac
aagctacataccgagaacttcggaacagtgcatgcattatatatcctggaggagatattt
cagtaa
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