Sphingobacterium psychroaquaticum: E2P86_01160
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Entry
E2P86_01160 CDS
T05967
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc03030
DNA replication
spsc03430
Mismatch repair
spsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2P86_01160
03430 Mismatch repair
E2P86_01160
03440 Homologous recombination
E2P86_01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsc03032
]
E2P86_01160
03400 DNA repair and recombination proteins [BR:
spsc03400
]
E2P86_01160
Enzymes [BR:
spsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2P86_01160
DNA replication proteins [BR:
spsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2P86_01160
DNA repair and recombination proteins [BR:
spsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2P86_01160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QBQ42962
LinkDB
All DBs
Position
272662..273225
Genome browser
AA seq
187 aa
AA seq
DB search
MTFTAIDFELATADYTSVCAVGIVKVENSQIVDEFYGLVQPPGNKYMWQTTRVHGIKSKD
TKDAPTFAEIFPKIEPYLKQQKMVAHNEKFDREVLMKTMTRFELPYKSLQLPKMWECTSK
IYSAKGFKKTKLSICCAIMGIELHHHDALSDARACAQLYIRRDQVTSELIMKHFPNTEIE
IKEHKAI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgacctttacagcgatagattttgaattggcaacagcagattatacaagtgtatgtgcc
gtaggtatagtgaaggtagagaatagtcagattgtggatgaattctacggtctggtccaa
cctcctgggaataaatatatgtggcagaccacacgtgttcatggtataaaatctaaggat
acgaaggatgcacccacttttgcggaaatttttccgaagatagagccctatctaaaacaa
caaaaaatggtggcgcacaatgagaaatttgatcgcgaggttttgatgaagacaatgacg
cgatttgagctgccttataaatccctgcaattgcctaaaatgtgggagtgtacgagtaaa
atttatagtgcgaaagggtttaaaaagacgaaattaagtatttgctgtgcgattatgggg
attgagttacatcaccatgatgcgctatcggatgcacgagcgtgtgcacagttgtacatc
aggcgtgatcaagttaccagcgaattgataatgaaacattttccaaatacggaaatagaa
ataaaagagcataaagcaatatga
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