Sphingobacterium psychroaquaticum: E2P86_01940
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Entry
E2P86_01940 CDS
T05967
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
spsc
Sphingobacterium psychroaquaticum
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsc03400
]
E2P86_01940
DNA repair and recombination proteins [BR:
spsc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
E2P86_01940
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
AAA_22
FtsK_SpoIIIE
ResIII
AAA_16
AAA
AAA_10
SLFN-g3_helicase
AAA_30
AAA_19
T2SSE
Zeta_toxin
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QBQ39976
LinkDB
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Position
481734..483284
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AA seq
516 aa
AA seq
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METNESAFIERVKSSYSPKGASIQLGAGILNGHIVTDARVNLALKMMNRHGLIAGATGTG
KTRTLQLIAEQLSDAGVPVFMLDVKGDLSGLAEPGVTNPALLERGEAVGVPFVPASFPIE
LFSLTGKLGTSMRIKVSDFGPVLLSRILDLNDTQTGVLAAIFKYADDTKLPLVDLNDLKK
LLSYLSEGPGADEIKDDYGKISTSTAGTILRKIVAVEQQGLAHIFGETAFDVKDLINKVD
GKGVISLLNISDVQDQPLLFSTFLLSLLAQLFKTLPEVGDLDQPKLVFFFDEAHLLFNGA
SKAFMSQIEQIVRLIRSKGVGVFFCTQASTDIPESVLGQLGNRVQHALRAFTPNDAENLR
KTVKTYPHSDFYAIDSVLTSLGIGQALITVLNDKGIPTEVVATHLVPARAVMGPIPSAEY
QQLVQQSSFVEKYQERQENRSAAEIIEEKMMTFQTKKAQEEAQKEAAKVNRSSGGRARQT
PLEAATNQASRTLAREGAKFLGKLATGILNSFFKKK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggaaactaacgaatcggcttttattgagcgggttaagtcatcatatagccccaaaggt
gcatcgatccaattaggtgccggtattctcaatggacatattgttacggatgcgcgcgta
aaccttgcactaaagatgatgaataggcatggactaattgccggggcgaccggaacgggg
aagacccggaccttacagcttattgcagagcagttatctgacgcgggtgttcctgttttt
atgttggatgtcaaaggagatctttccggattggcagaacctggagtaaccaatccagca
ctgttggagcgcggagaggcggttggtgtaccctttgtgccggctagttttccgatagaa
ttgttttctttaacgggtaaactggggacatccatgcgtattaaagtgagtgactttggg
cctgtgttgttatcccgcattttggatctgaatgatacacaaacgggcgttttggctgcc
atttttaaatatgccgatgatacaaaactgcctctggtggatttaaatgatttaaagaag
ttactttcttatttatcagaagggcccggagcagatgaaattaaggatgattatgggaag
ataagtacgtctactgccggaactattcttcgtaagattgttgccgttgaacaacaagga
ctggcgcatatctttggagaaacggcttttgatgttaaggatttaataaataaggtagat
ggtaaaggcgttatttctttattgaatatctccgatgtacaggatcagcctttattgttc
tctacatttttattgagcttgcttgctcagttgttcaaaacattgccggaagtgggggat
ttagatcagcctaagcttgtctttttcttcgatgaagcgcatcttttgtttaatggtgct
tcaaaagcttttatgagccagattgagcagattgtgcgtttgattcgctcgaaaggtgtt
ggtgttttcttttgtacacaagcttctaccgatattccggagtctgttttaggtcaatta
ggaaatagagtacaacatgcgttacgtgcttttactccgaatgatgctgaaaatttgcgt
aaaacagtaaaaacatatccccattcagatttttacgctatcgatagcgtgctcacatca
ttaggtatcggacaagcattgataaccgtgttgaatgataaaggtattccgaccgaggtt
gtcgccacgcatctagtgcctgcccgtgcggttatggggccgattccaagtgctgaatat
caacagctggtacagcagtcttcctttgtggaaaagtaccaggaacgtcaggaaaaccgg
tcggcagctgagattattgaggagaagatgatgacgtttcagactaaaaaagcacaagaa
gaagcacagaaggaagccgcaaaagtcaatcgatcaagcggagggcgggcgcgacaaacg
ccgcttgaggcagcaacaaatcaagcctctcgaacgctggcacgagagggcgcaaagttt
ctcggtaagcttgctacgggaatcttgaatagcttctttaaaaagaaatag
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