Sphingobacterium psychroaquaticum: E2P86_02200
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Entry
E2P86_02200 CDS
T05967
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E2P86_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsc03021
]
E2P86_02200
03400 DNA repair and recombination proteins [BR:
spsc03400
]
E2P86_02200
Enzymes [BR:
spsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E2P86_02200
Transcription machinery [BR:
spsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
E2P86_02200
DNA repair and recombination proteins [BR:
spsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
E2P86_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QBQ40023
LinkDB
All DBs
Position
526657..527649
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQRPDKVIMQKSTDFDGTFEFRPLEPGFGVTIGNALRRILLSSLEGYAITSVRFS
GVSHEFSTIKGVVEDVTEIILNLKQVRFKKTGEQGDNEKIFVVINGQEQFKAGDITKFSN
NFEVLNPEMVICNMDNAVTIEVELSVAKGRGYVNAEENKVTDGPVGFIAVDSIYTPIKNV
KYTIENYRVEQKTDYEKLLLDISTDGSIHPEEALKEAAKILIQHFMLFSDENMLLESQTK
EETKVVDEEILHMRKILKTELVDLDLSVRALNCLKAADIRTLSELVTYDVADMLKFRNFG
KKSLSEIQELVKSKGLSFGMNLSKYKLDEE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttagcatttcaaagaccggataaggttatcatgcaaaaatcaactgatttt
gatggtactttcgaatttcgtccattagagccaggttttggtgtaactattggtaatgct
ttgcgccgtattttattgtcctcattagaaggatatgcaattacgtcggtaaggttttca
ggcgtttcgcacgaattctctacgatcaaaggtgttgttgaagatgtaacagaaatcatc
cttaatttaaagcaagtgcgctttaaaaagacaggtgagcaaggtgataacgaaaaaatc
tttgttgtaatcaacggtcaagaacagttcaaagctggcgatattactaaattctccaat
aatttcgaggtattaaaccctgaaatggtgatttgtaatatggacaacgctgttactatt
gaagttgaattatcagtagctaaaggacgtggttatgtaaatgctgaagaaaataaagtt
actgatggtcctgtaggttttatcgctgtagattcaatctatacacctatcaaaaatgta
aaatatacaattgagaactaccgtgtagaacaaaagactgactacgagaaattgttgtta
gacatttctactgatggttctattcacccggaagaagcacttaaagaagcggctaagatc
cttatccaacactttatgttgttctctgacgagaatatgttgttagaatctcaaacgaaa
gaagaaactaaggttgttgacgaggaaatcttacacatgcgtaagatcttgaaaactgaa
ttagttgatctagacctttctgttagagcattaaactgtttaaaagcagctgatatcaga
actttatctgaattagttacttatgacgtagctgatatgcttaaattcagaaacttcggt
aaaaaatctttaagcgagatccaagaactagtgaaatctaaaggcttatcttttggtatg
aatttatcaaagtataaactggacgaagaataa
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