Sphingobacterium psychroaquaticum: E2P86_02395
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Entry
E2P86_02395 CDS
T05967
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
spsc
Sphingobacterium psychroaquaticum
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsc03016
]
E2P86_02395
Enzymes [BR:
spsc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
E2P86_02395
Transfer RNA biogenesis [BR:
spsc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
E2P86_02395
Prokaryotic type
E2P86_02395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QBQ40061
LinkDB
All DBs
Position
562725..563639
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AA seq
304 aa
AA seq
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MLRFEVMILGNSSATPMYGRHPTSQVLNFNEQLYMIDCGEGTQMQLARYGIKSNRINHIF
ISHLHGDHYLGLVGLLSSQHLMGRKSTLHVYGPAALEEILAIQFKHSATVLQYPLVFHPT
NPAEVEVILDTPALKVTSFPLQHRIDCTGFRFDEGRRSATLNATLVDQLDIPTPYLKLLK
RGIDYVDPDGTVYLASELTYPAPPSRSYAFCSDTLMNESYFETIQGVDLLYHESTFLHDM
ADRAKETLHSTGQEAAQVARTVGAKKLLLGHFSARYRDLQPFLDESQPFFANTLLSEEGK
WFLV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgctacgattcgaagtcatgattttgggaaatagttcggctacgcctatgtatgggcgg
caccctacttctcaagtgttgaacttcaatgaacagctttatatgattgactgtggcgaa
gggacgcaaatgcaactggcgcgctatggtatcaaaagcaatcgtataaatcatatcttt
atcagccatttacatggagatcattatttaggacttgtagggttgctttcctcgcaacat
ttgatgggaaggaagtcaaccctacatgtttatggtccggcggcattagaagaaattctt
gctattcagttcaagcactccgcaacagtactacaatacccgctcgttttccacccgaca
aatccggctgaagtggaggttatcctagatacgcccgcgctgaaagttacctctttccct
ttacaacatcgcattgattgtacgggatttcgttttgatgaggggcgtcgcagtgcgacc
ttaaatgcaacgttggtggaccagctcgacataccaaccccatacctcaagttacttaag
agagggattgattatgtggatcctgatggaactgtttatttagccagtgagctgacctat
cctgcgccgccgtcacgcagttatgccttttgttcggacaccttgatgaacgaaagttat
tttgagacgattcagggagtagacctcttgtatcatgaatcgacatttttacatgatatg
gcggatcgtgcaaaagaaacattacatagtacaggtcaggaggctgcacaggtcgctcgc
accgtgggagcaaaaaaacttcttttgggacatttctctgcccgatatcgagatctgcaa
ccctttctggatgaatcacaaccgttttttgccaatactttgctctcggaggaaggcaaa
tggtttttagtatag
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