Sphingobacterium psychroaquaticum: E2P86_03555
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Entry
E2P86_03555 CDS
T05967
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spsc
Sphingobacterium psychroaquaticum
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsc02000
]
E2P86_03555
Transporters [BR:
spsc02000
]
Other transporters
Pores ion channels [TC:
1
]
E2P86_03555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
DUF748
HALZ
DUF6089
Motif
Other DBs
NCBI-ProteinID:
QBQ40272
LinkDB
All DBs
Position
complement(841745..843061)
Genome browser
AA seq
438 aa
AA seq
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MKNLKNLTFLLAAGLISAGAQAQTKSTIEGTTPLGSSSEYRTWSIGVNGGILNQTNLFNF
ARRGNTDMDNNAGYSVYVKKQISPSFGIKAQYLGGKVGGKNAVLGTGFETKIPYSVALSG
EYTLANVNWRFFNSVMKPYAALGLGVMNSEATLIDGNTQTKQDKITKMYVPADIGLKFAI
AKGVNFDLGYQLNFVNKNFDGVVNGVFQPDVFTYIHAGVEFALGSTAKPFLGNSNPVATL
LADNAAKYDAIKAERDALKAANNALTARLDKWDSDLKDDDGDGVPNKFDKCPNTPSGTKV
DGSGCPLPEIKHETTVIEKIITEEDKKVVDEAIKNLEFELSKSTIREKSYASLDRVAAIL
IEKNFSLKLAGHTDNTGSMQLNMRLSKERAEAVKAYLVSKGANPSRIEATGYGPTQPIAT
NATAEGRQANRRVEFTLY
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccttaaaaatttaactttcttactcgcagctggtttgatttcagctggtgcg
caagcacaaactaaatcaacaatcgagggtactacgccactaggtagcagttcagaatat
cgtacgtggtctattggtgtaaacggaggtatccttaaccaaacgaacttgtttaacttt
gcacgcagaggcaatacggacatggataacaacgcaggatacagcgtgtatgttaaaaaa
caaatctcaccttctttcggcattaaagcacaatacttaggtggtaaagtaggtggaaaa
aatgcggtattaggaacaggttttgaaacaaaaatcccgtactccgtagctttatctgga
gagtacacgctagccaacgtaaactggagattcttcaacagcgtaatgaagccttatgcg
gcattaggtttaggtgtaatgaactctgaagcaacgcttatcgatggtaacacacaaact
aaacaggacaaaatcacgaaaatgtatgttcctgctgacatcggtttgaaattcgcgatc
gctaaaggtgtaaactttgacttaggctaccaattaaactttgttaacaaaaactttgac
ggtgttgttaatggcgtgttccaacctgatgtattcacatacatccacgcaggtgttgaa
ttcgctttaggatcgactgccaaaccattcttaggaaacagtaaccctgtcgctacctta
ctagcagacaacgcagcgaaatacgacgccattaaagcagagcgtgatgcactaaaagca
gcaaacaatgcattgacagcgagattagacaaatgggatagtgacttgaaagatgatgat
ggtgacggtgttccaaataaatttgacaaatgtccgaacaccccttcaggcactaaagta
gatggctcaggctgtccacttcctgagattaaacacgagacaactgttatcgaaaaaatc
atcaccgaagaagataagaaagtcgttgacgaagccatcaaaaacttagagtttgaattg
agcaaatcaacaatccgtgagaaatcatacgcttctttggatcgtgttgcagcgatcttg
attgagaaaaactttagcttgaaactagcaggccacacagataacacaggttcaatgcaa
ttgaatatgcgtctatcgaaagaaagagccgaggcagtaaaagcttacttagtatctaaa
ggagctaatccttcacgtatcgaagcgactggttacggaccaacacagcctattgcaaca
aatgcaacagcagaaggccgtcaggctaaccgtcgtgtggagtttactttgtactag
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