Sphingobacterium psychroaquaticum: E2P86_04300
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Entry
E2P86_04300 CDS
T05967
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc03030
DNA replication
spsc03430
Mismatch repair
spsc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E2P86_04300
03430 Mismatch repair
E2P86_04300
03440 Homologous recombination
E2P86_04300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsc03032
]
E2P86_04300
03400 DNA repair and recombination proteins [BR:
spsc03400
]
E2P86_04300
Enzymes [BR:
spsc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E2P86_04300
DNA replication proteins [BR:
spsc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E2P86_04300
DNA repair and recombination proteins [BR:
spsc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E2P86_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
T4_Spackle
Motif
Other DBs
NCBI-ProteinID:
QBQ40413
LinkDB
All DBs
Position
1017474..1018409
Genome browser
AA seq
311 aa
AA seq
DB search
MELQLKRPLAFFDLETTGVNISVDRIVEIAILKVLPSGEEQVLTMRINPEMPIPAESSMF
HGIYDEDVKDLPPFKEKAAEIAAFIGDADLAGYNSNKFDIPMLMEEFIRARVEFSLTGRA
FVDVQNIFHQMEQRTLKAAYRFYCNENLDNAHTAEADVRATYEVLKAQLTKYEGVAYEDK
HGNVTTPVVNDVEALHKFTNLSNPVDFAGRLVFDADGDATINFGKHKGKKVTHVFEVEPS
YYAWMQNGDFPLYTKKVLEQLWNEHRSQKRDAQQQERAAVNKVKVQQTKVSEPAKPITSD
MLKNLQGKFGK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaacttaaacgtcctttggcttttttcgatttagagaccacgggggtaaat
atttcagtagatcggattgttgagatcgcgatcttaaaagtgttgccaagtggagaggag
caggtattaacgatgcgtatcaatccagaaatgcctataccagcagagtcttccatgttc
cacggtatttatgacgaagatgtgaaagatcttcctccttttaaggagaaagcggcagag
attgctgcttttattggagatgctgatttagcgggatataattccaataaatttgatatc
ccgatgcttatggaagaattcatccgcgcgcgcgttgagttttctttgaccggtagagct
tttgtagatgtacaaaatattttccatcaaatggaacagcggacgctaaaagcggcgtat
cgattctattgtaatgagaacttagataatgcgcatacggcagaagctgatgttcgtgcg
acatatgaagtgttgaaggcacagctgacaaaatacgaaggagtggcttatgaagacaag
cacggaaatgttacaaccccagttgtaaatgatgtggaagctttgcataaatttaccaac
ttaagtaatccggttgattttgccggccgtctagtctttgatgctgacggtgatgcaaca
attaattttggtaaacataaagggaagaaggttacccatgtgtttgaagtggaacctagc
tattacgcttggatgcagaatggagacttcccattgtatacgaaaaaagtattggagcag
ttgtggaacgaacaccgtagccagaaaagggatgcgcaacagcaagagcgtgcggcggtg
aacaaagtaaaagtacaacaaacgaaggtaagtgaaccggcaaagcctattacatcagat
atgctaaagaacttacagggtaaatttggaaaataa
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