Sphingobacterium psychroaquaticum: E2P86_10560
Help
Entry
E2P86_10560 CDS
T05967
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E2P86_10560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsc03021
]
E2P86_10560
Transcription machinery [BR:
spsc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E2P86_10560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
UPF0122
PgaD
Motif
Other DBs
NCBI-ProteinID:
QBQ41566
LinkDB
All DBs
Position
2494925..2495785
Genome browser
AA seq
286 aa
AA seq
DB search
MRQLKITQSITNRESQSLDKYLHEIGKVDLITAEEEVILAQRIREGDQVALEKLTKTNLR
FVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETKGFKFISYAVWWIRQSILQAIAE
QSRIVRLPLNQVGSLSKISKAFSKLEQEYEREPSPEELADILETTVDKVSDTLSNSGRHV
SMDAPFVQGEENTLLDVLENSDPDTDSLLIDESLSEEIKRSLATLTEREREIIVLFFGLG
TNHQLSLEEIGEKFSLTRERVRQIKDKALQRLRHTSRSKILKSYLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctcaaaattacacaatccattaccaatcgtgagtcacagtcgttagacaag
tacttgcacgagattggtaaagtcgacttaattaccgcggaagaagaagtaatcttggca
caacgcattcgcgaaggagaccaagttgctttagaaaaattgacaaaaaccaacttgagg
ttcgttgtttctgttgctaagcagtaccaaaatcagggccttaccttaggcgatttgatt
aatgagggcaatttaggcctaattaaagcagcaaaacgtttcgatgagacaaaaggtttt
aaatttatctcttacgctgtatggtggattcgtcagtcaattttgcaggctattgctgaa
caatcgcgtatcgtacgtttacccctaaaccaagtggggtccttgagtaaaatcagcaag
gctttttcaaaattagaacaggaatacgagcgtgagccttctcctgaagaattagctgac
atcttggagactacggttgacaaagtgtcagacacactaagtaattcaggaagacatgta
tctatggatgctccatttgttcaaggggaagaaaataccctgttggatgttttggaaaat
agcgatccagatacagatagcttacttatcgacgaatcactatctgaagaaattaagcgc
tctttggcgactttgacggaacgtgagcgtgaaattatcgtattgttcttcggtctaggc
accaaccaccaattatcattagaggaaatcggtgaaaaatttagcctgacgagagaacgt
gtacgccaaattaaagacaaagctcttcaacgtttacgccacacttcgcgtagcaaaata
ttaaaatcttatttaggctag
DBGET
integrated database retrieval system
