Sphingobacterium psychroaquaticum: E2P86_14035
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Entry
E2P86_14035 CDS
T05967
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
spsc
Sphingobacterium psychroaquaticum
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsc03009
]
E2P86_14035
Enzymes [BR:
spsc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
E2P86_14035
Ribosome biogenesis [BR:
spsc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
E2P86_14035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
QBQ42205
LinkDB
All DBs
Position
3399428..3400876
Genome browser
AA seq
482 aa
AA seq
DB search
MPFNNKRNSRDDNSKKNRSNSESFKSKGGQSRQHSSSSDRKPFGKNSPGRSRSDRSDSTQ
NEHPFGRFEKSDRKPFQKRDDNRSFQKSDDRRSFNRSDRDDNRGERKSFDKPFNRSGRDD
NRGERKSFDKPFNRSGRDDNRGERKSFDKPFNRSGRDDNRGERKSFDKPFNRSGRDDNRG
ERKSFDKPFNRSGRDDNRGERSFDKSDYRGSKRNFSRDDEGSNGEDGKRFYPRKKIATAE
PKDDGLIRLNRYISNSGICSRRKADELIESGVVTVNGEAVTELGTKVDPAKDEIRYNGER
LKREKMVYILLNKPKDYITTTDDPQERRTVMHLVAKATKERIYPVGRLDRNTTGLLLLTN
DGNLAEKLSHPRNNISKIYNVELNKNLTQGDFNKIEFGIELEDGLIKPDDLSYVQGASKR
EVGIQIHSGKNRIVRRIFESLGYEVVKLDRVVYANLTKKDLPRGRWRYLEDRELVQIKHL
IK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaataataaacggaacagtcgtgatgacaactccaaaaaaaacagaagcaac
tcagaaagcttcaagtccaaaggtggtcaaagtcgccaacattcatcgagtagtgacaga
aaaccttttggtaaaaacagcccaggaagatcacgttctgatcgttctgactcaacacaa
aatgaacatccttttggacgatttgaaaaatcggacagaaagcctttccaaaaaagagac
gacaatcgttcttttcagaaatctgatgaccgtcgatccttcaatagatcggatagagat
gacaacagaggggaaagaaaatcatttgacaaaccgttcaacagatcgggtagagatgat
aacagaggggaaagaaaatcatttgacaaaccgttcaacagatcgggtagagacgataac
agaggggaaagaaaatcatttgacaagccgttcaacagatcgggtagagacgataacaga
ggagaaagaaaatcatttgacaagccgttcaacagatcgggtagagatgataacagagga
gaaagaaaatcatttgacaaaccgttcaacagatcgggtagagatgataacagaggagaa
agatcttttgacaaatcagactatagaggtagcaaaagaaactttagcagagatgacgag
ggtagtaacggagaagatggaaaacgcttttacccaagaaaaaagattgcaacggctgag
cctaaagatgacggcttaattcgtttaaaccgttacatttccaattcaggtatttgttcg
cgcagaaaagcggatgaattaattgagtcgggtgttgtcactgtgaatggagaagcagta
accgaactagggactaaagtagatccagcgaaagacgagatccgttataacggagaacgt
ctgaaacgtgaaaaaatggtttatatccttttgaataaaccgaaagattacatcacgaca
acagatgatccacaagaacgccgtacggtgatgcaccttgttgcaaaagcaacaaaagag
cgtatttatcctgtcggtcgactggatagaaatacgacaggtcttttgctattgaccaac
gatggaaacttagccgagaaattatctcatcctcgtaataatatcagtaagatatataac
gtagaactgaacaaaaatctaacacaaggagacttcaataagattgagtttggtattgaa
ttagaagatggtttaattaaaccagatgatttgagttacgtacagggagcgagtaagcgt
gaagttgggattcaaattcactccggaaagaaccgtattgttagaagaatattcgaatca
ttgggttacgaagtcgttaaattagatcgtgtcgtgtatgctaacttgactaagaaagac
cttccacgtggaagatggcgttatttagaagaccgcgaattggttcaaataaaacacctt
ataaaataa
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