Sphingobacterium psychroaquaticum: E2P86_16710
Help
Entry
E2P86_16710 CDS
T05967
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
spsc
Sphingobacterium psychroaquaticum
Pathway
spsc00521
Streptomycin biosynthesis
spsc00523
Polyketide sugar unit biosynthesis
spsc00525
Acarbose and validamycin biosynthesis
spsc00541
Biosynthesis of various nucleotide sugars
spsc01100
Metabolic pathways
spsc01110
Biosynthesis of secondary metabolites
spsc01250
Biosynthesis of nucleotide sugars
Module
spsc_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
spsc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
E2P86_16710 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
E2P86_16710 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
E2P86_16710 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
E2P86_16710 (rfbB)
00525 Acarbose and validamycin biosynthesis
E2P86_16710 (rfbB)
Enzymes [BR:
spsc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
E2P86_16710 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
NAD_binding_10
KR
NmrA
DXP_reductoisom
Motif
Other DBs
NCBI-ProteinID:
QBQ42697
LinkDB
All DBs
Position
complement(4046600..4047655)
Genome browser
AA seq
351 aa
AA seq
DB search
MKKILITGGAGFIGSHVVREFVNKYPEYHIVNLDALTYAGNLENLKDIENKPNYTFVKAD
ITDAAHMLAVFQEHQPEGVIHLAAESHVDRSITNPTAFVMTNVIGTVNLLNAAKEIWKDN
FEGKRFHHVSTDEVYGTLGETGLFREDTAYDPHSPYSASKASSDHFVRAYHDTYGLPIVL
TNCSNNYGPNHFPEKLIPLCIHNILNNKPLPVYGDGKFTRDWLFVIDHAKAIDLVFHNGK
NGDSYNVGGFNEWQNIDLVKELCKQVDEKLGRPQGTAAALITFVKDRPGHDLRYAIDATK
INQELGYQPSVTFEQGLSVTIDWFLNNQEWLDNVTSGDYQKYYEGQYVGNS
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatattaattacgggtggtgcggggttcattggatcccatgtggttcgggag
tttgttaacaagtacccagaatatcatattgttaatctagacgctttgacctacgcaggt
aatctcgaaaacctgaaagatattgagaataagccaaattatacttttgttaaagcggat
attacggatgctgctcatatgctggctgtttttcaagaacatcaaccagagggtgttatc
catcttgcagcagaatcacatgtggatcgttccattacaaatccgacagcgtttgtgatg
acgaatgttattggtactgtaaatcttctgaatgcggcaaaagaaatctggaaagataac
tttgaaggaaaacgcttccatcatgtatccacggatgaggtttacggtacgctaggtgaa
acgggacttttccgtgaagataccgcctatgatccgcattcaccatattcagcctctaag
gcgtcttcggatcactttgtgcgtgcataccacgacacatatggcttaccgattgtcttg
acgaattgttccaacaattatggacccaatcattttcctgaaaaattgatcccactttgt
attcataatatacttaataataagccacttccagtttatggagacggtaagtttacacgt
gattggctgtttgtcattgatcatgcaaaagcaatcgatcttgtcttccataatggtaag
aatggtgattcttacaatgttggtggattcaacgagtggcaaaatatagatttggtaaaa
gagttgtgtaagcaggtggatgaaaagcttggtcgaccgcaaggaacggctgctgcattg
atcacatttgtgaaagatcgtcctggtcatgacctacgctacgctattgatgcgacgaag
attaaccaagagctgggctatcaaccatcggtaacttttgagcaaggtttgtctgtaaca
atcgattggtttttgaataatcaggagtggttggataatgtgacttctggtgattatcag
aagtattatgaaggacaatatgtggggaatagttag
DBGET
integrated database retrieval system
