Staphylococcus shinii: JMB28_01275
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Entry
JMB28_01275 CDS
T08256
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00230
Purine metabolism
spsd00240
Pyrimidine metabolism
spsd01100
Metabolic pathways
spsd01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
JMB28_01275 (nrdD)
00240 Pyrimidine metabolism
JMB28_01275 (nrdD)
Enzymes [BR:
spsd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
JMB28_01275 (nrdD)
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GFIT
Motif
Pfam:
NRDD
Gly_radical
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
QRA16880
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Position
276550..278400
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AA seq
616 aa
AA seq
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MNKLEQDLKNLITKDPTVINENANKDSATFSTMRDLTAGVVSKSYALNYLLPEHVATAHK
EGDIHFHDLDYHPFQPLTNCCLIDAESMLKNGFQIGNAAVTSPKSIQTASAQLVQIIANV
SSSQYGGCTIDRVDELLSHYVQYNEAKHRELAKKFVQPQDIETYVDYQVSQDIGDAIESL
EYEINTLYTSNGQTPFVTLGFGLGTDTYSRKIQQAILNTRIKGLGKDRITAIFPKLVFSI
KKGVNFSSKDPNYDIKQLALECSTKRMYPDILNYDKTVEILGDFKAPMGCRSFLPAWKNE
DGEFENNGRCNLGVVTLNVPRMAIESNGNIEMFWKIFHERMTVMHDALVYRIQRISEVTP
DNAPILYKNGAFKHRLTDEEDITTLLKGKRATLSMGYIGLYEAATLFYGPNWETQSIAKK
FTLDILKAMKVYQLKWTEQYDIWFSIYSTPSESLTDRFCRLDREKYGEIPHITDKGYYQN
SFHYDVRKDITPFEKIDFEKEYPFYASGGYIHYCEYPKLNHNLKALEAVWDYSYDKVSYL
GTNIPIDHCRECDFRGDFKTTATGYQCPECGNDDPTTVDVVKRTCGYLGNPVQRPTIEGR
HKEMCARVKHLKDQAI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactcgaacaagatttaaagaatttaataaccaaagatcctacagtaataaat
gaaaacgccaataaggatagcgccacattttcaacgatgagagatttaacagcaggtgta
gtatctaaatcatatgcgctaaattacttattaccagaacatgttgcaacagctcataaa
gaaggggatatacattttcatgatttagattatcatccatttcaaccacttactaattgt
tgtttaatagatgcagaaagtatgctcaaaaatggttttcaaattggtaatgcagcagtc
acttcacctaaatcaattcaaacagcttctgcccaactcgtacaaattattgccaatgtt
tctagtagccaatacggagggtgtacaatcgatcgggttgatgaattactgagccattac
gttcaatataatgaagctaagcatcgtgaattggctaaaaaatttgtacaaccacaagac
atagaaacttacgttgattatcaagtttcacaagatattggcgatgcaatagaaagtttg
gaatatgaaatcaacacattgtatacatctaatggtcaaacaccattcgtaacattaggc
tttggcttaggaacagatacatatagccgtaaaattcaacaagcaattcttaacactaga
atcaaaggtttgggcaaagatcgcattactgccatttttccaaaacttgtattttcaatt
aaaaaaggcgtgaattttagttcaaaagatccaaattatgacataaaacaattggcatta
gaatgttctacgaaaagaatgtatcctgatattttaaattatgataaaacggtagaaata
ttaggtgattttaaagctccgatgggctgtcgttcatttttaccagcatggaagaacgaa
gatggagaatttgagaataatggaagatgtaatctaggtgttgtgacactaaatgtacct
agaatggcaattgaatctaatggtaacattgaaatgttttggaagatattccatgaacga
atgacagtaatgcatgatgcgctagtatatcgaattcaacgcatttctgaagtaacacct
gataatgcgcctattttatataaaaatggtgcgtttaaacatcgattaactgatgaagaa
gatattacgacgttgttaaaaggcaaacgagctacattatccatgggatatataggtttg
tatgaagcagctacattattttatggtcctaattgggaaacgcaatccatagctaaaaaa
tttacgctagatatattaaaagcgatgaaagtttaccaattgaaatggactgaacaatat
gatatttggttcagcatttatagtacaccaagtgagtctctaactgatcgtttttgtagg
cttgatagggaaaaatatggtgaaataccacacatcactgacaagggatattaccaaaat
tcatttcattacgatgtgagaaaagatattacgccatttgagaaaattgattttgaaaaa
gaatatccgttttatgcaagtggtggttatatccattactgtgaatatccgaagttaaat
cataatttaaaagcgttggaagcggtatgggactattcatacgataaggtcagttattta
ggtacgaatatcccgattgatcattgtagagaatgtgattttagaggtgattttaaaacg
acagcaacgggctatcaatgtcctgaatgtggtaatgatgatcctactacagttgatgta
gtaaaacgtacatgtggctatcttggtaatcctgttcaacgacctacgattgaaggacga
cataaagaaatgtgtgcgcgagtgaaacacttgaaagaccaagcaatatga
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