Staphylococcus shinii: JMB28_01645
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Entry
JMB28_01645 CDS
T08256
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00250
Alanine, aspartate and glutamate metabolism
spsd00280
Valine, leucine and isoleucine degradation
spsd00310
Lysine degradation
spsd00410
beta-Alanine metabolism
spsd00640
Propanoate metabolism
spsd00650
Butanoate metabolism
spsd01100
Metabolic pathways
spsd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JMB28_01645 (gabT)
00650 Butanoate metabolism
JMB28_01645 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JMB28_01645 (gabT)
00280 Valine, leucine and isoleucine degradation
JMB28_01645 (gabT)
00310 Lysine degradation
JMB28_01645 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JMB28_01645 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spsd01007
]
JMB28_01645 (gabT)
Enzymes [BR:
spsd01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
JMB28_01645 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
JMB28_01645 (gabT)
2.6.1.48 5-aminovalerate transaminase
JMB28_01645 (gabT)
Amino acid related enzymes [BR:
spsd01007
]
Aminotransferase (transaminase)
Class III
JMB28_01645 (gabT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Dynein_light
Motif
Other DBs
NCBI-ProteinID:
QRA16948
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All DBs
Position
370251..371567
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AA seq
438 aa
AA seq
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MSDKFNYYKKQREKYVARGVGNGNLHVANEAQSATIKDVEGNVFIDFAGAIGTLNVGHTH
PEITKHLKTQLDKFIHPGFNVIMYESYLNLAQKLTEITPGSFEKKSILLNSGAEAVENAV
KIARKYTDRQAVVSFVRGFHGRTNLTMSMTSKVKPYKFGFGPFAPEVYQAPYPNISEKSE
ELSNEAYTDQIINKLHDFFIETVDPTDVACIVMEPVQGEGGFIIPDSKFVKAVKQICDDN
GIVFVADEIQSGFARTGKTFAIEHFDVEPDLITVSKSLAAGFPLSGVVGKSEIIDSAAPG
ELGGTYAGNPLACEAALKVIEIIETEDLNGKAERLGYNLETYLTSLSETYNQVSRIRRLG
AMVAFEVVNPETGEPDKALTGKLVQVANEKGLLLLSAGIKGNVVRFLPPLVITDDELNEG
LRILTDVFETVISKEGIA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaatttaattattataaaaagcaacgtgaaaaatatgtagcacgcggtgta
ggaaacggaaatttgcatgttgctaatgaagcgcaaagtgcaaccattaaagatgttgaa
ggtaatgtatttattgattttgccggcgcaattggaacattgaatgtgggacatacacat
cctgaaattacgaagcacttaaaaacacaattagataaatttatacatccagggtttaat
gtgattatgtatgaaagttatctaaacttagcacaaaagttaacagagattacaccaggt
agctttgaaaaaaaatcaatattgcttaattcgggcgcagaagccgtagaaaatgcagtg
aagattgcaagaaaatacaccgacagacaagctgtcgtttcatttgtaagagggtttcat
ggtagaacaaatttaactatgtctatgacaagtaaagtgaagccttacaaattcggtttt
gggccatttgcgccagaagtttaccaagcaccttaccctaatatttctgaaaaatctgaa
gaattatcaaatgaagcttatacagaccaaattatcaataaattacatgatttctttata
gaaacggtagatccaactgatgtagcttgtattgttatggaacctgttcaaggtgaaggt
ggatttattatcccagattctaaatttgtaaaagcagtcaagcagatttgtgatgataat
ggtattgtcttcgtcgctgatgaaatacaaagtggctttgcgagaacgggtaaaacattt
gctatagaacattttgatgttgaaccagatttaatcacagtttctaaatcattggctgca
ggatttccattaagtggtgtagtgggtaaatcagaaattattgatagcgctgcgccagga
gaattaggtggaacttatgctggtaatccattagcttgtgaggctgcgcttaaagttatt
gaaattatagaaacagaagatttaaacggtaaagctgaacgattaggttataacttagaa
acatatttaacatcgttgagtgaaacgtataatcaagtctcaagaatacgacgtttaggt
gcaatggttgcttttgaagtggttaatcctgaaactggtgaacctgacaaagcattaaca
ggcaagcttgtacaagtagcaaacgaaaaaggtttattgttgctatctgcaggtattaaa
ggaaatgtcgttagattcttaccaccattagttattacagatgatgaattaaatgaagga
ttacgtattttaactgatgtgtttgagactgtgatttctaaagaaggtatcgcataa
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