Staphylococcus shinii: JMB28_04130
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Entry
JMB28_04130 CDS
T08256
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spsd
Staphylococcus shinii
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsd03016
]
JMB28_04130 (truA)
Enzymes [BR:
spsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JMB28_04130 (truA)
Transfer RNA biogenesis [BR:
spsd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JMB28_04130 (truA)
Prokaryotic type
JMB28_04130 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QRA17417
LinkDB
All DBs
Position
899716..900510
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AA seq
264 aa
AA seq
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MRVLVNISYQGSQFLGFQIQQNGRTVQQQFEKILKRMHKHDVRIHPSSRTDRGVHAIEQY
FHFDTELDIPEQQWQYAMNRALPGDIYVNHVSFVSDDFHCRYDCVGKSYRYKIYQSKHKD
PFLNGLKTHIAETLDIDKMNTAARYFIGTHDFTGFCSQKTEVVSKVRTLYESRIEKTENG
FDYIVTGSGFLYNMVRVLIAFLIEVGKGKRQPEEIPKLLEDKDRNKVPFTAPAEGLYLEK
IYLAPSELTTDFGNDIKLHRKKSI
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttttagtaaatatttcttatcaaggaagccaattcctaggttttcaaatacaa
caaaatggaagaacggtacaacaacaattcgaaaagatattaaagcgtatgcataagcat
gatgtgagaattcacccaagcagtagaacagatagaggtgtacatgcaattgagcaatat
tttcattttgacacagagttggacatccctgaacaacaatggcaatatgcgatgaatcga
gcattacccggtgatatatatgtcaatcatgtcagttttgttagtgatgattttcattgt
agatatgattgtgtaggtaaatcttaccgatataaaatttatcaatctaaacacaaagat
ccgtttcttaatggcttaaaaacacatatcgctgaaacgttagatattgataaaatgaat
acagctgcacgatactttataggtactcatgattttacagggttctgttcgcaaaaaaca
gaagttgttagcaaagtgagaacgctatacgaaagtcgtatagaaaaaacagaaaatggc
tttgactatattgtcaccggctcaggtttcctatataatatggtgcgtgtgttaatagcc
tttttaattgaagtaggcaaaggaaaacgacaaccagaagaaatacctaaattattagag
gataaagatcgtaataaagtaccgtttactgcaccggcagaagggttatatttagagaag
atttatctagcgccaagtgaattaaccactgattttggtaatgatataaaattacatcga
aaaaaatctatatga
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