Staphylococcus shinii: JMB28_04500
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Entry
JMB28_04500 CDS
T08256
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
spsd
Staphylococcus shinii
Pathway
spsd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JMB28_04500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsd03021
]
JMB28_04500
03400 DNA repair and recombination proteins [BR:
spsd03400
]
JMB28_04500
Transcription machinery [BR:
spsd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JMB28_04500
DNA repair and recombination proteins [BR:
spsd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JMB28_04500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
QRA17478
LinkDB
All DBs
Position
972985..973536
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AA seq
183 aa
AA seq
DB search
MRIQDYTKEMVDEKSFIDMAYTLLNEKNDTMNLYDIIDEFKALGHYEDGQIEDRIVQFYT
DLNTDGRFLNVGENIWGLRDWYSVADIEEKIAPTIQKFDILDDDAEEDKNLKLLGEDETD
DDDDIPAVTDDQETLNDPEDPEEDDVDEDLNESDIVIDEDDEDFDEEDEEDDENEEEEED
FEE
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgagaattcaagattatacaaaagaaatggttgatgagaaatcatttatcgatatggct
tatacattattaaacgaaaaaaatgatacgatgaatttatatgatatcattgatgaattt
aaagcactaggccactatgaagatgggcagattgaagatagaattgttcaattttatacg
gatttaaacacagatggacgttttctaaatgttggagaaaatatttgggggttacgtgat
tggtattcagttgctgatatcgaagagaaaattgctccaacaattcaaaaattcgacatt
ttagatgacgatgctgaagaagataaaaacttaaaattacttggtgaagatgaaactgac
gacgatgatgatattccagcggtaactgatgaccaagaaacactaaacgatccagaagat
cctgaagaagacgatgtagatgaagatctaaatgaatcggatatcgttatcgatgaggac
gacgaagattttgatgaagaagacgaagaagacgatgaaaatgaagaagaagaagaggat
tttgaagaataa
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