KEGG   Staphylococcus shinii: JMB28_05200
Entry
JMB28_05200       CDS       T08256                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spsd  Staphylococcus shinii
Pathway
spsd03030  DNA replication
spsd03430  Mismatch repair
spsd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spsd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JMB28_05200
   03430 Mismatch repair
    JMB28_05200
   03440 Homologous recombination
    JMB28_05200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spsd03032]
    JMB28_05200
   03400 DNA repair and recombination proteins [BR:spsd03400]
    JMB28_05200
Enzymes [BR:spsd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JMB28_05200
DNA replication proteins [BR:spsd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JMB28_05200
DNA repair and recombination proteins [BR:spsd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JMB28_05200
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: QRA17608
LinkDB
Position
complement(1114296..1114850)
AA seq 184 aa
MTSDAFIALDFETANGKRTSICSVGMVKVINHQITETFNTLINPNDFFSQQNIAVHGIHP
EEVADAPTFKTVYPYMLKFIGDLPVVAHNAAFDMTVLHESIRALGIETPCMTYFCSLQLS
RRTIHNHRYGLNYMMQYYNLDFHGHHDALNDAKACAMITFRLLKHYDNLPSMLKVYGKDL
RDKD
NT seq 555 nt   +upstreamnt  +downstreamnt
atgacttcagatgcctttattgctttagattttgaaacagcaaatgggaaacgaacgagt
atttgttcggttggtatggttaaagttattaaccatcaaataacagaaacgtttaacacc
cttattaatcctaatgacttcttttcacaacaaaatattgcagtacacggtattcatccc
gaggaagttgcagatgcccctacttttaaaactgtgtatccatacatgttgaaatttata
ggtgatttaccagtagtagcgcataatgcggcttttgatatgactgtgttacacgaaagt
attagagcattgggaattgaaacaccatgcatgacttatttttgttcacttcaattatca
cgaagaacaattcataaccaccgttatggtttaaattatatgatgcaatattacaattta
gactttcacggacaccatgatgcactaaatgacgctaaagcttgtgctatgatcacattt
agacttctaaaacactatgacaatttaccaagtatgcttaaggtatatggtaaagatctt
agagataaagactaa

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