Staphylococcus shinii: JMB28_06115
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Entry
JMB28_06115 CDS
T08256
Name
(GenBank) phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00260
Glycine, serine and threonine metabolism
spsd00270
Cysteine and methionine metabolism
spsd00680
Methane metabolism
spsd01100
Metabolic pathways
spsd01110
Biosynthesis of secondary metabolites
spsd01120
Microbial metabolism in diverse environments
spsd01200
Carbon metabolism
spsd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
JMB28_06115
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JMB28_06115
00270 Cysteine and methionine metabolism
JMB28_06115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsd04147
]
JMB28_06115
Enzymes [BR:
spsd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
JMB28_06115
1.1.1.399 2-oxoglutarate reductase
JMB28_06115
Exosome [BR:
spsd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
JMB28_06115
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
ACT_AHAS_ss
F420_oxidored
KARI_N
NAD_binding_2
DeoC
NAD_binding_7
UDPG_MGDP_dh_C
3HCDH_N
ACT_4
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
QRA17748
LinkDB
All DBs
Position
complement(1272711..1274327)
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AA seq
538 aa
AA seq
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MYKILVSDPISPEGLKSLIDHKDFEVNINTELTENELIEEIKDYQGLIVRSQTLVTEAII
EASPNLKVIARAGVGVDNIDVDAATKNGVIVINAPDGNTISATEHSMAMILSMARNIPQA
HQSLKDGKWDRKTYRGTELFNKTLGVIGAGRIGLGVAKRAQSFGMNILAFDPYLSEDKAK
ELNVTRATVEEIAEQADFVTVHTPLTPKTKGIVGKAFFEKAKPTLQIINVARGGIIDEEA
LLEALDNNQIQSAAIDVFETEPATESPLVENEKIIVTPHLGASTVEAQEKVAVSVANEIV
DIFENGNVLNAINAPRMTYSEINDELKPYIELSKLTGEVGIQLLEKAPRELHIKYEGDIA
LDDTSLLTRTLVSGVLKRDLAERVNLINALVLLNEQGVSYNIEKNTKHRGFSNYIELTLI
NKDKQIKIGATVLNGYGPRIVRINDYPVDFKPEQHQLVINHNDRPGIVGRTGQILGEYGI
NIASMHLGRTNQGGNALMILSIDHPVTEDVIDGLYQIEGFNLIRSVELEIDNNINYNI
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaattttagtctctgatccaatctcaccagaaggtttaaaaagtttaattgac
cataaggatttcgaagttaacatcaatacagaattaactgaaaatgaattaattgaagaa
attaaagattaccaagggttgattgtacgtagtcaaactctagttactgaagctattatt
gaagcatcacctaaccttaaggtaattgcacgtgcaggtgtgggtgtagataatatcgat
gtagatgccgctaccaaaaacggtgtcatagtaatcaacgcgccagatggtaatactatt
tctgccactgaacattcgatggcaatgattttatcaatggctcgaaatatccctcaagcg
caccaatcattaaaagatggaaaatgggaccgtaaaacttatagaggtacagaacttttt
aataaaacacttggtgtaatcggtgcaggtagaattggacttggtgttgctaaacgcgca
caaagtttcggtatgaatatattagcctttgacccatatttatcagaagataaagctaaa
gaattaaacgtaacacgtgcaacagttgaagaaattgcagaacaagcagatttcgttact
gtacacacaccattaacacctaaaacaaaaggcatcgttggtaaagcattttttgaaaaa
gcaaaaccaacattgcaaattatcaatgtagcacgtggtggtattattgatgaagaagca
ttattagaggctttagataataatcaaatacaaagtgctgcgattgatgtttttgaaact
gaaccagcaactgaatcccctcttgtagaaaatgaaaaaattatcgttacgcctcactta
ggtgcgtctacagttgaagcacaagaaaaagtagctgtatcagttgctaatgaaatcgta
gatatttttgaaaatggtaacgtattaaatgcaattaatgcgccacgtatgacttatagc
gaaattaacgatgagttaaagccatatatcgaattaagcaaattaacaggtgaagttggt
atccaattacttgaaaaagcacctcgtgaactccacattaaatacgaaggtgacatcgcg
ctagatgacacaagtttattaactagaaccttagtatcaggtgtattaaaacgagattta
gctgaacgtgttaacttgattaatgcattagtgcttctaaatgaacaaggtgtatcttat
aatattgaaaaaaatactaaacaccgtggttttagtaactatattgaattaacacttatc
aataaagacaaacaaatcaagattggtgctactgtgttaaacggttatggtccaagaatt
gttcgtattaatgactatccagtagactttaaacctgaacaacatcaacttgttattaat
cataatgatagacctggtattgtaggacgtaccggccaaatcttaggtgaatatggtatc
aatattgcttctatgcatcttgggcgtactaatcaaggcggtaacgcactcatgattttg
tcaatagaccacccagtaacagaagatgtcattgacggtttataccaaattgaaggtttc
aatttgattagaagtgtagaattagaaattgataacaatattaattataatatttag
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