Staphylococcus shinii: JMB28_06895
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Entry
JMB28_06895 CDS
T08256
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
spsd
Staphylococcus shinii
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spsd03019
]
JMB28_06895
03009 Ribosome biogenesis [BR:
spsd03009
]
JMB28_06895
Enzymes [BR:
spsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JMB28_06895
Messenger RNA biogenesis [BR:
spsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JMB28_06895
Ribosome biogenesis [BR:
spsd03009
]
Prokaryotic type
rRNA helicases
JMB28_06895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QRA17893
LinkDB
All DBs
Position
1439151..1440491
Genome browser
AA seq
446 aa
AA seq
DB search
MANHPFEKFNLEPSLIDAVKDLNFDQPTEIQSRVIPKIIKQVNLIGQSQTGTGKSHAFLL
PLINSIDTEYKEPQAIVVAPTRELAQQLFDVASHITKFKEDVSVKLFIGGTDIEKDRSRA
KNQPQLVIGTPTRINDLAKHGDLHVHLASYLVIDEADLMIDLGLIDEVDHIATRLDEKAH
IAVFSATIPKSLHPFLNKYLENPDFVEIENTEKNKKNIEFYLIPTKGEAKIEKTLKLIDI
LNPYLCIIFCNSRDSADELANQLNAAGLKLGMIHGGLSPRERKQQMKRIRNLEFQYVIAS
DLASRGIDIDGVSHVINFDVPNDIDFFTHRVGRTGRGQYKGVAITLYSPDEENNVALIEQ
RGYHFENVDIKDNELKAIKAHNLRQSRKNKDDHLTNQLKYKVKSNKKKVKPGYKKKFKRD
LDDLKRKERKQFSKQKSRQERKNKKG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcacccatttgagaaatttaatttagaaccaagtctgattgacgctgtgaaa
gatttgaattttgatcaaccgactgaaattcaaagccgagtaataccaaaaataataaaa
caagtaaacttaatcggccaatcacaaacagggacaggtaaatcccatgcgtttttatta
ccgttaatcaattcaatagatacagaatacaaagaaccacaagcaattgttgtagctcct
acaagagaattagcgcaacaactttttgatgttgctagccatataacaaaatttaaagaa
gatgtgtcagtaaaactattcataggtggcacagatattgaaaaagatcgtagtcgtgca
aagaatcaaccacaacttgttatcggtacgcctacacgtataaatgatttagctaaacac
ggggatttacatgtacacttagcatcctacttagtcattgatgaagcagacttaatgata
gatttaggactaatagatgaagttgatcatattgctacaagattagatgagaaagcgcat
attgcagtgtttagtgcgacaatacctaaatcgttacatccatttttaaataaatatctt
gaaaatcccgattttgttgagatagaaaatacagaaaagaacaaaaaaaatatagaattc
tatttaattccgacaaaaggcgaagctaaaatagaaaagactttaaagttaattgacata
ctaaacccatatttatgtatcattttctgtaatagtagagacagtgctgatgaattagct
aaccaactcaatgctgctggtttgaaattaggtatgattcatggcggactttcacctaga
gaacgtaaacaacaaatgaaacgtattagaaatttagaattccaatatgtgatagctagt
gatttagcatcacgtggtattgatattgatggtgtaagtcatgtaattaactttgatgta
ccaaatgatattgatttcttcacacatcgtgtaggacgtactggtagagggcaatataaa
ggcgttgcaattactttatacagtcccgatgaagaaaataatgttgcgctaatcgaacaa
cgtggttatcattttgaaaacgtagatattaaagacaatgaattaaaagcaattaaagct
cataatttacgccaatcacgtaaaaataaagatgatcacttaacaaatcaattaaaatat
aaagttaaaagcaataagaaaaaagtaaaaccaggttataagaagaaattcaaacgtgat
ttggatgatttaaaacgtaaagaacgtaagcaatttagtaaacaaaagagtagacaagaa
agaaaaaataaaaaaggatag
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