Staphylococcus shinii: JMB28_06925
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Entry
JMB28_06925 CDS
T08256
Name
(GenBank) penicillin-binding protein 2
KO
K12553
penicillin-binding protein 3 [EC:3.4.-.-]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00550
Peptidoglycan biosynthesis
spsd01100
Metabolic pathways
spsd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JMB28_06925
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JMB28_06925
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsd01011
]
JMB28_06925
Peptidoglycan biosynthesis and degradation proteins [BR:
spsd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JMB28_06925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QRA17899
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All DBs
Position
1444630..1446681
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AA seq
683 aa
AA seq
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MLKRLKEKSNDEKIRNTMNKRISFIFGVIVFIFAVVVLRLGYLQIAQGSHYKQLIKNSEN
LTVNEAVPRGRILDRNGKVLVDNASKKAITYARGRKTSQTEVLKIAKDLSDLIKMNTDKI
TDRDKQDYWIQLHPNKARTLMQSEQALLDDGSISQDDYDEALYKKIGEKQTNTLSDKDLQ
VLAIYREMMSGSALDPQMIKNEDVTDEEYAAVSQKLSDLPGVNTTMDWDRKYPNGDTLRG
IFGDVSTTEEGIPKELTEQYLAKGYSRNDRVGKSYLEYQYDDILKGKKKEMKYTTDKSGE
VIDSKVINPGSRGDDLVLSIDIDLQKKTEEYLEKQISKLRSEGAKDMDNALIVVQNPNNG
DILAMAGKQIDKNGDLTDYDIGTFTSQFAVGSSVKGGTLLAGYQNNAINVGDQMVDEPLK
FAGGLTKRSYFNQDGRKTINDKEALMHSSNVYMFKTALKMAGSPYSANMTLPNDISEAGQ
KLRKGLNQVGLGIKTGIDLPNETNGQIEPLTDNPGNFLDLAIGQYDTYTPLQLAQYVSTI
GNNGYRVQPHIGLEIRQATNKDTLGPVKEKVKGKVLNRVNNSGEQIKQIQDGFEMAFNEK
PGTGYQSFNDTEVPSAGKTGTAEVFQNGESRVNSTYVGYAPIKDPKLAFSIVYTNQPVPE
PWLNGGDLGRDVINYYFKERAEK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaaagattaaaagaaaagtcaaatgatgaaaaaattagaaatacaatgaataaa
agaattagctttatatttggtgtgattgtatttatttttgcagtagttgtcttaaggtta
ggttatttacaaattgcacaaggttctcattataagcaactgattaaaaatagcgaaaat
ttaacagttaatgaagccgtaccaagagggcgcatattagatagaaatggtaaagtcctt
gttgataacgcttctaaaaaagcgattacatacgcgcgtggtagaaaaacttcgcaaaca
gaggttttaaaaattgcaaaagatttatcagatttaattaaaatgaacactgacaaaata
acagatcgagataaacaagactattggattcaattacatccaaataaagcgagaacatta
atgcaaagcgaacaagcattacttgatgatggaagtatttctcaagatgactatgacgaa
gctttatataaaaaaattggggaaaaacaaactaacacattaagtgacaaagatttacaa
gtcttagctatttatagagaaatgatgtctggttcagctcttgatccacagatgattaaa
aacgaagatgtgactgatgaagaatacgcagcggtatcacaaaaattatctgatttgcca
ggtgtaaatacgacaatggattgggatagaaaatatcctaatggtgatacattaagaggt
atttttggagatgtatctactactgaagaaggtattcctaaagaactaactgagcaatac
ttggctaaaggatattctcgtaatgatcgagtaggaaaatcatatctagaatatcaatat
gatgacattttaaaaggtaagaaaaaagagatgaagtataccactgataaatcaggtgaa
gtcatcgattccaaagtgattaatccaggttcccgtggagatgatttagtacttagcatt
gacattgacttacagaaaaaaaccgaagaatacctagagaaacaaatatctaaactgcgt
agtgaaggcgctaaggatatggacaacgcattaattgttgtacaaaatcctaataacggc
gatattttagcaatggctggtaaacaaattgataagaacggcgatttaacagattatgat
ataggcacctttacatcacaatttgctgttggttcatctgtaaaaggcggtactttatta
gctggttatcaaaataatgcaattaatgttggtgatcaaatggtcgatgagccattgaaa
tttgctggtggtctgacaaaacgctcttactttaaccaagatggtaggaaaacgataaat
gataaagaagcactaatgcactcatctaacgtttatatgttcaagacagccttgaagatg
gctggatcgccatattcagcgaatatgacattaccaaacgacatctctgaagcaggtcaa
aagcttcgtaaaggcttaaaccaagtagggctaggcattaaaacaggtattgatttaccg
aacgaaacaaacggacaaattgaaccattaacagataatccaggtaatttccttgattta
gcaataggacaatatgatacctatacacctctacaattagcccaatatgtttctacaatt
ggtaataatggttatagagttcaaccacatattggattagaaattagacaggcaacaaat
aaagatactttagggcctgttaaagagaaagttaaagggaaagtccttaatagagtaaat
aactctggggaacaaattaagcaaatccaagatggctttgaaatggcatttaatgaaaag
cctggtacaggttatcaaagctttaacgatactgaagttccatctgcaggtaaaacaggt
acagctgaagttttccaaaacggtgaatcaagagtaaattcaacgtatgtaggttatgca
ccaattaaagaccctaaacttgcgttttcaattgtgtatacaaaccaacctgtacctgaa
ccatggttaaatggtggggacttaggtagagatgttataaactactatttcaaagaacga
gctgaaaaataa
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