Staphylococcus shinii: JMB28_07985
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Entry
JMB28_07985 CDS
T08256
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spsd
Staphylococcus shinii
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsd03400
]
JMB28_07985
DNA repair and recombination proteins [BR:
spsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JMB28_07985
Archaeal homologous recombinant proteins
JMB28_07985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_15
Ala_racemase_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QRA15592
LinkDB
All DBs
Position
complement(1668740..1671769)
Genome browser
AA seq
1009 aa
AA seq
DB search
MRPMTLKLNNFGPFLNETIDFNHVNNNQLFLISGKTGSGKTMIFDAIVYALFGEASTKDR
KESDLRSHFAESKKSMIVEFEFKLRNQYFKIKRQGAFVKEGNKNKTLGQLAVYEMEAETY
ELRESKITNGNQFIKELLGVNAEQFRQLFILPQGEFKRFLLSKSSEKQEILRTLFNSQRF
EEIQKNLSEDVKEVRGQIEQRYHLLETNWLDLETFNDETLIEYKSINPRQTNQVLEVLDV
FDEKAKQKQNKLKQQKDEHKTKLNDAEACLKNNQKLEETLNKLAENQQNYEQLLTQENDI
NEKIKRLNAINEVRPIANLLESKDKLYTKQQKIKEDINEKKEIISELEIQIKKAEEQLDA
HKNESEKITVSKNFIEKTKLFFERSQKYKAAYEEQQSLQEGFASLQTKLEALIQQLEEIK
GKINGRVPNYKKIEQVNETIYSLNNEVAVLKQNELDKKEYLQLQERKHQKANYSEKLNDE
LQQLTVAYKKIDKTSIDLNNKQDLISTLQSAINVGDTCPICGNQVHTITQHIDFDDLTAR
HQSLAQLEQKKNATTEDKIKVESELNYIEEQLAKFDKEKLENTNYHELETEVKKKIAQKQ
KIEKKNEEIVELKELQQQYEQQFHQLELDKKTKQHNLKENEIAINDFENTTGFTNVDAFI
KIFENYQSEIEKYEKNLEELENSIQQYKSELALEQNNKNHLNNSSSEIEQEINNINVKID
DEMKRIGFTDIEQVYNTVSKVKEKESLENEITEFNKSKQSFELVISQLKDEISDKKLEDT
QQLTEAFEQQQQAFELISSELSQHEYKITFNNKKISEIKEIIGKLESELKTQQEIFQLAE
ILAGKNEQKLTLENYVLIYYLERILAQANQRLSLMTGQRYQLVRKSQVSQGYSGLEIDVF
DAHSNQSRHISSLSGGETFQASLALALGLSEIVQQESGGIALDSMFVDEGFGTLDQETLE
TALDTLLSLKSTGRMVGIISHVSELKQRIPLILEVVTEQYQSVTTFKKQ
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgatgacacttaaattaaataattttggtccttttttaaatgaaacaattgat
tttaatcatgtgaataataatcaattgtttttaattagcggtaaaactggttcaggaaaa
actatgatttttgacgctatcgtttacgctttatttggagaagcttctacaaaagataga
aaagagagtgatttgagaagtcattttgctgaaagtaaaaagtctatgatagtagagttt
gaattcaaattaaggaatcaatattttaaaataaaaagacaaggtgcatttgtcaaagag
ggtaataaaaacaaaacgcttggtcagcttgccgtgtatgaaatggaagctgaaacatat
gaacttagggaaagtaaaataacaaatggtaatcaatttattaaagaattgttgggcgtg
aatgctgaacaatttagacagctatttattttacctcaaggcgaatttaaaagattttta
ttatcaaaaagctctgaaaaacaagaaatattaaggacactttttaatagccagcgtttt
gaagaaatacaaaaaaacttatctgaagatgttaaagaagttagaggacaaatagaacag
agatatcatttattagaaacaaattggttggatttagaaacgttcaatgatgaaacatta
attgaatataaatccattaacccaagacaaacaaatcaggtgcttgaagtattagatgta
tttgatgaaaaagcaaagcaaaagcaaaataaattaaaacaacaaaaggatgaacataaa
actaaactaaatgatgctgaggcttgtttgaaaaataatcaaaaattagaagaaacatta
aataaattagcagaaaatcaacaaaattatgagcaattattaactcaagaaaatgatata
aatgaaaaaattaagcgattgaatgcaattaatgaggtaaggccaattgctaatttatta
gaatctaaagataaattatatacaaaacaacaaaaaataaaagaagatattaatgagaaa
aaagaaattatttcagagcttgaaattcaaataaaaaaagcagaagaacagttagatgca
cataaaaatgagtcagaaaaaataacagttagtaaaaactttattgaaaaaacgaaactt
ttctttgagagatctcaaaagtacaaagcggcttatgaagagcaacaatcacttcaagaa
ggttttgcatcacttcaaacaaagctagaagcactaatacagcaattagaagaaattaaa
ggaaaaataaacggcagggtaccgaattataagaaaatagaacaagtaaatgaaacaatt
tacagtttaaataatgaagttgcagtactaaagcaaaatgaacttgataaaaaagaatac
ttacaattacaagaaagaaaacatcaaaaagcaaattacagtgaaaagttaaatgatgag
cttcaacagctaacggttgcttataaaaaaatagataaaacaagtatagatttaaataat
aagcaagatttgattagtactttgcaatcagcaataaatgttggagacacatgcccaatt
tgtggtaatcaagtacatactataacgcaacatattgattttgatgatttaactgcacgt
caccaaagtcttgctcaattagaacaaaagaaaaatgctacaactgaagataaaattaaa
gttgaaagtgaactaaattatattgaagaacagttggcgaaatttgataaagagaaacta
gaaaatacaaattatcatgaacttgaaacagaagttaagaaaaaaatagcgcaaaaacaa
aagattgaaaaaaaaaatgaagagattgttgaattaaaagaattacaacaacaatatgaa
caacaattccatcagttagaattagataagaaaactaaacaacataacttgaaagaaaat
gaaatagctataaatgattttgaaaatactacaggttttactaatgtagatgcttttata
aaaatatttgaaaactatcaaagtgaaatagaaaaatatgaaaaaaacttggaagaattg
gaaaatagcatacaacaatacaagagtgaacttgctttagaacaaaataacaaaaatcat
ttaaataatagctcgtctgaaattgaacaagaaatcaataatataaatgtgaaaattgac
gatgaaatgaaacggattggtttcacagacatagaacaagtatataatacagtttctaaa
gttaaagaaaaagaatcactagaaaatgaaataactgaatttaataaatcaaaacaatct
tttgaattagttatttcgcaactaaaagatgaaatttctgataaaaaattagaagataca
caacaactaactgaagctttcgaacaacagcagcaagcgtttgaattaatctcttctgaa
ttgagtcaacatgaatataaaatcacatttaataataaaaaaatcagtgaaataaaagaa
ataattggtaaattagaaagtgaattaaaaacacaacaagaaatttttcaattagcagaa
attttagcggggaaaaatgaacaaaaattaacattagaaaattacgttttgatttattat
ttagaaagaatccttgcgcaagccaatcaacgtttatctttaatgacgggtcaacgctat
caactagtacgtaagtcacaggtttcacaaggatacagtggacttgagattgatgttttt
gatgcacactctaatcaatctaggcatattagctcattatctggaggggaaaccttccaa
gcttctttagctttagcattaggcttaagtgaaattgttcaacaagagtcaggtggtatt
gcactagattctatgtttgtcgatgaaggatttggaacattagatcaagaaactttagaa
acagctttagatacactgttaagtttaaaatctacaggcagaatggtgggcattatttca
catgtaagtgaattgaaacaaagaattccactcattttagaagtggttacggaacaatat
caaagtgtgacaacttttaagaaacaataa
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