Staphylococcus shinii: JMB28_08370
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Entry
JMB28_08370 CDS
T08256
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spsd
Staphylococcus shinii
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsd03016
]
JMB28_08370 (truB)
Enzymes [BR:
spsd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JMB28_08370 (truB)
Transfer RNA biogenesis [BR:
spsd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JMB28_08370 (truB)
Prokaryotic type
JMB28_08370 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QRA15665
LinkDB
All DBs
Position
complement(1754190..1755107)
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AA seq
305 aa
AA seq
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MYNGILPVFKDRGLTSHDVVFKLRKILKTKKVGHTGTLDPEVSGVLPICIGAATKVSDYI
MEMGKTYEATVSLGSTTTTEDQTGDVIEQKYILPGEITAENVDLILKQFEGVITQIPPMY
SSVKINGKKLYEYARNNEEVERPERQVHVYKIKRTSELRFEDKHCQFDIIVGCGKGTYIR
TLATDIGSALQFPAHMSKLTRTQSGGFDIKDSLTLNEIVELHEHESLQEKLFPIEYGLKG
LPQIIISEENIKAKILNGQKFEKTMFQQNIDDMVTMVDEDTQKVIAIYEPHPEKQDEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggtatattacctgtatttaaagatcgaggattgacgagtcatgatgtggtt
tttaaattaagaaaaatattgaaaactaaaaaagtagggcacactggcactttagatcct
gaagtttctggtgtgttaccaatatgtataggggctgcgacaaaagttagtgactacata
atggaaatgggtaaaacttatgaagcaacagtaagtttgggtagtacaactactaccgaa
gatcaaactggtgatgtgatagagcaaaaatatatactacctggtgaaattactgcagaa
aatgttgacttgatactcaaacaatttgaaggagtaattactcaaataccaccaatgtat
tcctcggtaaaaataaatggtaagaaattatatgaatatgctagaaataacgaagaagtt
gagcgacctgaacgtcaggtacacgtatataaaattaagcgcacatccgaattacgtttt
gaagataaacactgtcaatttgatataattgtaggatgtggtaaaggtacatatatacga
acacttgcaacagatatcggcagcgcattacaattccctgcgcatatgtcaaagttaacg
cgtacacagagtggtggatttgacattaaagatagtttgactttaaatgaaatagtggaa
ttacatgagcatgaatcattacaagaaaagttatttcctatagaatatggtttgaaaggt
ttaccacaaattataatttcagaagaaaatatcaaagctaaaattttgaatggacaaaaa
tttgaaaaaacgatgttccagcaaaatatagacgatatggttacaatggtagatgaggac
acacaaaaagtaatagcaatttatgaacctcatccagaaaaacaagatgaaattaaacct
aaaaaggtgtttaactaa
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