Staphylococcus shinii: JMB28_08760
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Entry
JMB28_08760 CDS
T08256
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00220
Arginine biosynthesis
spsd00240
Pyrimidine metabolism
spsd00250
Alanine, aspartate and glutamate metabolism
spsd01100
Metabolic pathways
spsd01110
Biosynthesis of secondary metabolites
spsd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JMB28_08760 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JMB28_08760 (carB)
00220 Arginine biosynthesis
JMB28_08760 (carB)
Enzymes [BR:
spsd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JMB28_08760 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
GARS_A
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
PA
Motif
Other DBs
NCBI-ProteinID:
QRA15740
LinkDB
All DBs
Position
complement(1847858..1851031)
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AA seq
1057 aa
AA seq
DB search
MPKRQDIETILVIGSGPIIIGQAAEFDYAGTQACLALKEEGYRVILVNSNPATIMTDTEI
ADKVYIEPLTHDFIARIIRKEQPDALLPTLGGQTGLNMAIQLHDSGELEANNVQLLGTEL
KSIQQAEDRELFRTLMNELNVPVPESDIVNTVEQAFEFKEEVGYPLIVRPAFTMGGTGGG
ICYNDEEFKEIVGNGLHYSPATQCLIEKSIAGYKEIEYEVMRDKNDNAIVVCNMENIDPV
GIHTGDSIVVAPSQTLSDVEYQMLRDVSLKVIRALGIEGGCNVQLALDPHSMDYYIIEVN
PRVSRSSALASKATGYPIAKLAAKIAVGLTLDEMLNPITETSYAAFEPTLDYVISKIPRF
PFDKFEKGERVLGTQMKATGEVMAIGRTYEESLLKAIRSLEYGVHHLGLPNGETFDLDYI
KSRIKDQDDERLFFIGEAIRRGTTLEEIHEMTKIDYFFLNKFQHIINIEHDLKANKGDVN
YLKFAKNYGFSDRVIAHRFDMTETEVHDLRIANGITPVYKMVDTCAAEFESATPYYYGTY
EYENESIVTEKEKILVLGSGPIRIGQGVEFDYATVHAVWAIQQAGYEAIIVNNNPETVST
DFSISDKLYFEPLTEEDVMNIIDLEQPKGVVVQFGGQTAINLADKLAKHDVQILGTSLED
LNRAEDRKEFEALLHKIGVPQPNGKTATSPQEALENARNIGYPVVVRPSYVLGGRAMEIV
NSDAELEDYMNQAVKASPDHPVLVDRYLTGKEIEVDAICDGETVIIPGIMEHIERAGVHS
GDSIAVYPPQTLTQEEIDTLEDFTIKLAKGLNIVGLINIQFVIAHDGVYVLEVNPRASRT
VPFLSKITDIQMAQLAMRAIMGEKLANLGYEAGIQPYANGVFVKAPVFSFNKLKNVDITL
GPEMKSTGEVMGKDSTMEKALYKGLTASGMEVSDHGTVLMTVSDKDKDEIVSIAHRLNEV
GYKILATEGTAQKLAENEIPSEVVGKIGGEDDLLTRIQNGEVQIVVNTMTKGKEVERDGF
QIRRASVENGVPCLTSLDTVDALTSVLESMTFTMKNM
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtcaagatatagaaacgattttagttataggatcaggaccaattattatc
ggtcaagctgcagagttcgattatgcaggtactcaagcatgtttggcgttaaaagaagag
ggctaccgcgttatattagttaactcaaacccagctacaatcatgacggacactgaaatt
gccgataaagtgtatattgaaccgttaacgcatgattttattgcacgtattatccgaaaa
gagcaaccagatgcactcttgcctacattaggcggtcaaacaggattaaatatggcaatt
caattacatgatagtggtgaattagaagctaataatgtgcagctattaggtacagaattg
aaatctattcaacaagcagaagacagagaattatttagaacattaatgaatgaactaaat
gtaccagttcctgaaagtgatatcgtcaatacagttgaacaagcatttgaatttaaagaa
gaagttggttatccgttaatcgtaagaccagcatttacaatgggtggtactggcggcggc
atttgttataacgacgaagaatttaaagaaatagtaggtaatggcttacattatagtcca
gccacacagtgtttaattgaaaaatcaatcgctggctataaagaaattgaatatgaagtt
atgcgtgataaaaatgacaatgctatcgttgtctgtaatatggagaatattgaccctgtg
ggtatacatacaggtgactcaatcgtagtagcacctagtcaaacgttatcagatgtagaa
tatcaaatgttacgtgacgtgtcgttaaaagtgatacgcgcattaggcattgaaggtggt
tgtaacgtacaacttgcactagacccacattctatggattactatatcatcgaggtgaat
cctcgtgtatctcgttcgtcagcgttagcgtctaaagcaacaggttacccaattgcaaaa
ctagctgccaaaattgcagtaggattgacattagatgaaatgttaaatccaattactgaa
acatcatacgcagcctttgaaccaacattagattacgtgatttctaaaattccacgtttt
ccatttgataaatttgaaaaaggtgaacgtgttctaggtacgcaaatgaaggccacaggc
gaagtaatggcaattggcagaacatatgaagagtccttacttaaagcaattcgctcttta
gaatacggtgtccatcatttaggcttaccaaacggtgagacatttgatttagattatatt
aaatcacgtatcaaagaccaagatgatgaacgtctattctttataggagaagcaatccgc
agaggtactacattagaagaaattcatgaaatgacaaaaatagattatttcttcttaaat
aaattccaacatattattaatattgagcatgatttaaaagctaataaaggggatgttaat
tacctgaaattcgctaaaaattatggctttagtgaccgtgtcatcgcgcaccgcttcgat
atgacagaaactgaagttcacgatttaagaatagcaaatggtataacaccagtgtataaa
atggtagatacatgtgctgcagaatttgagtcagcaacaccatattattatgggacatat
gaatacgaaaatgaatctatcgttacagagaaagaaaagattctagtgctaggatcaggt
ccaatacgtattggtcaaggcgttgaatttgactatgcaacagtgcacgctgtgtgggca
attcaacaagctggttatgaagcaattattgtaaacaataatccagaaacagtatcaact
gacttttcaatatcagataaattatactttgaaccactaactgaagaagatgtcatgaat
atcattgatttagaacaacctaaaggtgtagtcgttcaatttggtgggcaaacagcgatt
aacttggctgataaacttgcaaaacatgacgttcaaattctaggaacatcattagaagat
ttaaatagagcagaagaccgtaaagaattcgaagcattattgcataaaattggtgtgcca
caaccaaatggtaagacggctacatcacctcaagaagcactagaaaatgcaagaaacatc
ggttatccagtcgttgtaagaccatcttacgtattaggtggacgagcgatggagattgtt
aatagtgatgcagaattagaagactacatgaatcaagctgttaaagctagtccagatcac
cctgtattagtagataggtacttaacggggaaagaaattgaagttgatgctatatgtgat
ggagagactgtaattattccaggtatcatggaacatatagaaagagcgggcgttcattca
ggtgactctattgcagtttatccaccccagacattgacacaagaagaaatagacacatta
gaagatttcactattaaattagcaaaaggcttaaacatagttggattaattaatattcaa
tttgttatcgcacacgacggcgtgtatgttttggaagtaaatccacgtgccagtcgtacg
gtgccattcttaagtaagattactgatattcaaatggcacaattggcaatgcgtgccata
atgggagaaaaacttgctaatttaggttatgaagcgggtattcaaccgtatgcaaatggt
gtgtttgttaaagcaccggtctttagttttaataaattgaaaaatgtagatattacgctt
gggcctgaaatgaaatctacaggtgaagtgatgggcaaagattctacaatggaaaaagcg
ctatacaaagggttaactgcaagtggtatggaagtcagtgaccacgggacagtcttgatg
acagtaagtgataaagataaagatgaaattgtatctatcgcacatcgcttaaacgaagtc
ggctataaaattttagcgacagaaggtactgcccagaaattagctgaaaatgaaattcct
tcagaagtcgtaggcaaaattggtggcgaagatgatctattaactcgcattcaaaatggt
gaagttcaaatcgtcgttaatacaatgacaaaaggaaaagaagttgaacgtgatggcttc
caaatcagacgtgcatctgttgaaaatggtgtgccttgtctaacatcgttagatacagta
gacgcactaacaagtgtgcttgaaagtatgacttttacaatgaaaaacatgtaa
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