Staphylococcus shinii: JMB28_08865
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Entry
JMB28_08865 CDS
T08256
Name
(GenBank) penicillin-binding protein
KO
K12552
penicillin-binding protein 1 [EC:3.4.-.-]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00550
Peptidoglycan biosynthesis
spsd01100
Metabolic pathways
spsd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JMB28_08865
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JMB28_08865
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsd01011
]
JMB28_08865
Peptidoglycan biosynthesis and degradation proteins [BR:
spsd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JMB28_08865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
QRA15760
LinkDB
All DBs
Position
complement(1873017..1875314)
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AA seq
765 aa
AA seq
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MAKRKIRLKKPKFLIKQSKIGAVLLILGFGLLFFTLVLRYSYIMLTGHSSGEDLIMKANE
KYLVNSQQQPERGKIYDRNGKILAEDVERYKVVAIVDKKASEGSDKPKHVTDKKETAKKL
ATVIDMSAKEIEEKLDNKKAFQVEFGQKGTDLTYQEKEKIEKMKLPGVTLYPETERFYPN
GNFASHLIGMAQKDPDSGDLKGAMGVEKIFDSYLSGQKGALSYIHDIWGYIAPNTKKEKT
PKRGDDVHLTLDSNIQVFVEEALDGMVEHYKPKDLFAVVMDAHTGEILAFSQRPTFNPET
GKDFGKKWANDLYQNTYEPGSTFKSYGLAAAIQEGKFEPDKKYTAEPREVMGSKISDWNK
VGWGEIPMSLGFTYSSNTLMMHLQDLVGADKMKDWYEKFGFGQSTNGMFDGEATGGIAWD
NEAQQKTSAFGQSTTVTPVQMLKAQSAFVNDGNMIKPWYVDNITNPVSKDTFYKGKKEYD
GKPITKDTAKKVRTELDKVVNSEDSHAKNYQIDGYDVAGKTGTAQVADPDNGGYVEGENP
YFVSFIGDAPKDDPEVIVYAGMSLAEKNDQEAYEMGVSKAFKPIMENTLKYLNVGDKNTK
DNSDVKYSEVPNVEGQETQKAQDKINSKSLKPIVIGDGEKITKQSVSANKEVLPNSKVLL
LTDSDITMPDMTGWSKEEVVAFELLTKTKVTTKGSGFVSNQSVTKGQKISSKDKIEVTLS
SEDINGQTSKDESSSDKDSDNNKDSKDKDDNKDSDENKDSKDNES
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgaaaaattagattaaaaaaacccaagtttcttattaaacaaagtaaaata
ggggcagtcctactcattcttggattcggactgctcttttttacgttggttttaagatat
tcatatataatgctaactggacattcttcaggcgaagatttaattatgaaggcaaacgag
aaatatttagttaatagccagcaacaacctgaacgtggaaaaatttatgaccgtaatggg
aagattttggcagaagacgtcgaacggtataaagtcgtggctattgttgataaaaaagca
agtgaaggtagcgataaacctaaacacgttacagataagaaagaaactgctaagaagtta
gcgacagtcattgatatgtctgctaaagaaattgaagaaaaattagataataaaaaagcg
ttccaagttgaatttggacaaaaaggaactgatttaacatatcaagaaaaagaaaaaatt
gaaaaaatgaagttacctggtgtaacgctttatccagaaactgaacgtttttatcctaat
ggaaactttgcatcacatttaattggaatggcccaaaaagatccggatagtggcgacttg
aaaggcgctatgggcgttgagaaaatatttgatagttatttatctgggcaaaaaggagca
ttatcttacatccatgatatatggggttatattgcacctaatactaagaaggaaaaaaca
cctaaacgtggggatgatgtacatttaacattggactctaatatccaagtatttgttgaa
gaggcattagatggcatggtcgaacactataaaccgaaagatttattcgctgttgtaatg
gacgcacataccggtgaaatactcgcgtttagccagcgtccaacttttaatccagaaaca
ggaaaagatttcggtaaaaagtgggcaaatgatttataccaaaacacatatgagcctggt
tcaacctttaaatcatatggcttagcagctgctatacaagaagggaaatttgaaccagat
aaaaaatatacagccgaacctagagaagtcatgggatcaaaaatttctgactggaacaag
gtgggttggggagaaatcccaatgtcactaggattcacatattcgtctaatacattaatg
atgcacctgcaagatttagttggcgcagataaaatgaaagactggtatgagaaatttggt
ttcggtcaatctacaaacggtatgtttgacggggaagctactggtggaatcgcttgggat
aatgaagcacaacagaaaacatctgcgtttggtcagtctactacagtaacaccagtacaa
atgcttaaagcgcaatctgctttcgttaatgacggtaacatgattaagccttggtatgtt
gataatataacgaaccccgtcagcaaagatactttttataaaggtaagaaagaatatgat
ggtaaacctataacgaaagatacagctaaaaaagtgcgtactgagttagataaagttgta
aatagtgaagatagccatgctaagaactatcaaatcgatggttatgatgttgcaggtaaa
acaggtacagcacaagttgcagacccagataatggtggttatgttgaaggtgaaaatccg
tattttgttagttttatcggtgatgcaccaaaagatgaccctgaagtaattgtttatgct
ggtatgagtttagcagagaaaaatgatcaagaagcttatgagatgggtgtaagtaaagca
tttaaacctattatggaaaatacgctaaaatatctgaatgttggagataagaatactaaa
gacaactcagatgtgaaatatagtgaagtacctaatgttgaaggacaagaaacgcaaaaa
gcgcaagataaaataaatagtaagtctctaaaacctatagtaattggcgatggagagaaa
attactaagcaatctgtgagcgctaataaagaagtattgcctaacagtaaagtattatta
ttgacagatagtgatattacaatgcctgatatgacgggttggtcgaaagaagaagttgtg
gcatttgagttacttacgaaaactaaagtaacaacaaaaggtagtggatttgtatcgaat
caatctgttactaaaggacaaaaaataagcagcaaagataaaattgaagtaacgttatct
tcagaagatattaatggccaaacttcaaaagacgaatctagttcggacaaagactcagat
aataacaaagattcaaaagacaaagatgacaacaaagactcagatgaaaataaagattca
aaagataatgaatcgtag
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