Staphylococcus shinii: JMB28_09010
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Entry
JMB28_09010 CDS
T08256
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JMB28_09010
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spsd01007
]
JMB28_09010
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsd03016
]
JMB28_09010
Enzymes [BR:
spsd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
JMB28_09010
Amino acid related enzymes [BR:
spsd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
JMB28_09010
Transfer RNA biogenesis [BR:
spsd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JMB28_09010
Prokaryotic type
JMB28_09010
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
FDX-ACB
tRNA_bind
B5
ThiS
Peptidase_M41
Motif
Other DBs
NCBI-ProteinID:
QRA15786
LinkDB
All DBs
Position
complement(1902168..1904570)
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AA seq
800 aa
AA seq
DB search
MFISKEWLESYVEVDQPVNVLAERITRTGIEVDDIIDYTKDIKNLVVGYVQSKATHPDAD
KLNVCQVDIGEEEPVQIVCGAPNIDAGQTVIVATVGGRLPGGVKIKRAKLRGERSEGMIC
SLQEIGVPTNLVPKQFEDGIYVFSSEVTPGTDALTALYLDDQVMEFDLTPNRADALSMIG
TAYETAALYNVPMVKPETQSNENNEQTADEISVTIQNEDKVPYYSARVVKNVTIEPSPEW
MQMRLIKAGIRPINNVVDISNYVLIEYGQPLHMFDKDQIGSKQIDVRQAKEGEIITTLDD
QERKLVTSDIVITNGNSPIAIAGVMGGDFSEVTEATTNVVIEGAIFDPVSIRHTSRRLNL
RSEASSRFEKGIATEFVDEAVDRACYLLQTYAGGTVTQGRVAEGDLGEFVTPIDISVSKV
NQTIGFELAAKDIEAIFVQLGFETTNTDDVLTVMVPSRRKDITIKEDLIEEIARIYGYDE
IPSTLPVFEHVTHGSLTDRQSKSRIVKASLEGAGLNQAINYSLVDKERANHFALQNRDTV
ALLMPMSEAHSTLRQSLIPHLIDAVAYNVARKNTQVRLYELGRVFFGNGEGELPDEVEYL
SGILTGDYTVNAWQGKKEEIDFFIAKGIVDRVAEKLDIQFEYEAGEINGLHPGRTAYVKL
NGKVIGFVGELHPQIEKDNDLKRTYVFELNYDELMAVSVGYINYQPIPRFPGVSRDIALV
INRDIPSAKLVNIIQQNGGDILQEAEVFDVYEGEHVAEDEKSIAIRLSYLDTEDTLTDDK
VNAVHEAILTALQAEGATIR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttcaaaagaatggttagaatcatatgttgaggttgatcaacctgttaacgtg
cttgctgaacgtatcacacgaactggtattgaagtagacgatattattgattatacaaaa
gacattaaaaatctagttgtaggctatgtacaatcaaaagcgacacaccctgatgccgat
aaactcaatgtttgccaagttgatattggtgaagaagaaccagtccaaatcgtttgtggc
gcacctaatatagatgccggtcaaacagttattgttgcaacggttggaggtagattacca
ggtggagtgaaaattaaacgtgcaaagttacgtggagaacgttcagaaggcatgatttgt
tcacttcaggaaattggtgtaccaacaaacttagtgcctaaacaattcgaggacggtatc
tatgtattttcatcagaagtgacgcctggtactgatgcgttgactgcgttatatttagat
gatcaagttatggaatttgatcttacaccaaatagagctgatgcattgagtatgattggt
acagcctatgagacggcagcgttatataatgtgccaatggtaaaaccagaaacccaaagt
aatgaaaataatgaacaaactgctgatgaaatcagtgtaactattcaaaatgaagataaa
gtaccttattatagtgcgcgtgtcgtaaaaaatgtaactatcgaaccttcaccagagtgg
atgcaaatgcgtttgattaaagcaggcatccgtccgattaataatgtagttgatatatca
aactatgttttaattgaatatggccagccgttacacatgtttgataaagaccaaattggt
tctaaacaaatcgatgttcgccaagcaaaagaaggtgaaattataacaacattagatgat
caagaacgtaaattagtaacatctgatatcgtgatcactaacggtaattcaccaattgct
attgctggtgtgatgggcggagacttctcagaggtaactgaagcgacaacaaatgttgtt
attgaaggtgctatatttgatccagtatcaattcgccatacatcaagacgattgaattta
agaagtgaagcttctagccgttttgaaaaaggaattgctacagaatttgtagacgaagcg
gttgatcgtgcttgttatttactgcaaacatacgcaggtggtactgttacacaaggacgt
gtcgctgaaggtgatttgggtgagtttgtaacacctattgatatttcggtttcaaaagtt
aatcaaacaattggttttgaactagctgcaaaagacattgaagctatcttcgtgcaactt
ggttttgaaacaacgaacactgatgatgtactaactgttatggtgccttcacgtcgtaaa
gacatcacaattaaagaagatttaattgaagaaatcgcacgtatatatggttatgatgaa
attccttcaacactaccagtatttgaacatgttactcatggttcgttaacggatagacag
tctaagtctcgtattgtaaaagcgtctttagaaggtgcaggcttaaaccaagctattaat
tattcacttgtcgataaagaacgagctaaccactttgcattgcaaaaccgtgatacagtt
gcgttgttaatgccaatgagtgaagcacattctacgttgcgtcaaagtttgattccacat
ttaattgatgctgttgcatataatgtagcacgtaaaaatacccaagtgcgcttatatgaa
cttggtcgtgtcttctttggtaacggtgaaggtgaattaccagatgaggttgaatattta
agtggtatcttaacaggtgattatacagtgaacgcttggcaaggtaagaaggaagaaata
gacttcttcatagctaaaggtattgtggatcgagtggctgagaagttagatatacaattt
gaatatgaagctggcgaaattaacggtttacacccaggtagaacggcttacgtgaaatta
aatggaaaagttattggatttgtaggagaattacatccacaaattgaaaaagacaatgat
ttaaaacgtacttacgtattcgagttgaattatgatgaattaatggcagtatctgtaggt
tatattaattatcaaccaatacctagattcccaggcgtatcaagagatattgcattagtt
atcaaccgcgatataccttcagcaaaattagtaaatataattcagcaaaatggtggcgat
atattacaagaagctgaagtatttgatgtttatgagggcgaacatgtcgctgaagatgaa
aaatcaatagcaattcgtttatcatatttagatactgaagatacacttacggatgataaa
gtgaatgcggtacatgaagcaatattgactgctttacaagcagaaggtgctacaattaga
tag
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