Staphylococcus shinii: JMB28_09820
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Entry
JMB28_09820 CDS
T08256
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
spsd
Staphylococcus shinii
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsd03400
]
JMB28_09820 (addB)
Enzymes [BR:
spsd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JMB28_09820 (addB)
DNA repair and recombination proteins [BR:
spsd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JMB28_09820 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QRA15934
LinkDB
All DBs
Position
complement(2081473..2084940)
Genome browser
AA seq
1155 aa
AA seq
DB search
MELNAYIGRAGTGKSKAIIEEIKTKMREDPLGDPIVLIAPTQNTFQLEQSFVNDESLNGS
LRTEVLHFERLSYRVFQEVGGLVEQQLSKAGTEMMIYDIIQQHQSELKLYRSQVKYYGFS
EKLYEQIQDFKKYAVTPQQLNDYISENDLQTRTKHKLQDIALVYKHLEDRIDGTYVSTED
SLQRFITMMEQSEWLKRAEIYIDGFHNFSTLEYQIIRSLVKYAKKVTVVLTTDGDKDMFS
LFRKPSESLTHIEEIANNLNVGLHTKRFDEVYRFENSDLVNLERNFNALQFEPRVSNGDI
AILEASGMREEINEVARRILRETREKGYRFQDIAILYRDEAYAYLMESILPQFDIPYNID
VKPSMTHHPIMEMIRSLIEVIQTNWNFDPLMRLFKTDILSKKFKDSHYLIDILENFVLER
GIYGKRWLDEKYFDIEQFRKMGLKRQPLTDEERETFERVIQMKTDVINKVMIFEERMNHA
TTAIEFATAFYESLEAFDLPSQLMTERDTLDFNGQHKDAEEIDQIWHGFIQTLDDLVTVF
GEQTMSKSRFLELLDIGLEQLEFVMIPQKLDQVSVGTMDLAKVDNKQHVYLVGANDGVIP
QTVSSSSLITDEEKKYFQEQSSIELSPTADILQMDEAFVCYIAMTRSCKQVTFSYSLMGS
GGDQKEPSPFLSQIQQLFTNLEVQNIHHQHQAQPLTLMEHPHQTKIALFESLKAWLGDEI
VAETWLDTYQVMRDDESLNDGLDYLLSALTYDNETVQLSESLSKELYGSTINASVSRFEG
YQACPFKHFASHGLRLNERTKYKLENFDLGDIFHQVLKFISEKVNGDFKNLNPKQIHKLT
VEALSEILPEVQFNLLNSTAYYRYLSQRIGAIVETTLMALKYQGNYTKFTPQRFEAGFRR
KPKDNSELLAKPLYTKQGIPINIRGQIDRIDTYKNGEESFVNIIDYKSSKYSGTLDLTKV
YYGMQMQMMTYMDIVLQNKSRLGLTDLTKPGGLLYFHVHEPRIKLAWNQLSEEKRDSEFI
QSFKLSGLLNSDESVLDAFDSRLEPSYNSDIVPLGLKKDGAIKSNSKVADEDTIYKLIHH
NKQNFIETASNIMDGHTEVAPMKYNQTLPCDFCSYKSVCHVDGMIDSKRYRTVDESIDPL
EEVQNVIVESEDDGE
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaatgcttatattggcagagcaggcacagggaagtcaaaagcaataattgaa
gaaattaaaacaaaaatgcgagaagatccattaggcgatcctattgtcttaattgcgcct
acacaaaatacttttcaacttgagcaatcattcgtaaatgatgaatcactaaatggtagt
ttgagaaccgaagttttacactttgaacgattaagttatcgtgtatttcaagaagttggt
ggcttggtagaacaacaattatctaaagcaggaactgaaatgatgatttatgacatcata
cagcaacatcaatcagaattgaaattataccgttctcaagttaaatattatggatttagt
gaaaagctctatgaacaaatacaagattttaaaaaatatgcggtaacaccgcaacaatta
aatgattatatttcagaaaatgatttacaaacaagaacaaaacataagttacaagatatt
gcactggtttataaacatttagaagatagaattgacgggacatatgtatctactgaagat
agtttgcaaagattcatcacgatgatggaacaatctgaatggttgaaacgagcagaaatc
tatattgatgggtttcataacttctcgacattagagtatcaaattatccgtagtttagtt
aaatacgctaaaaaagttacggttgtattaacaactgatggcgataaagatatgtttagt
ttatttagaaaaccttcggaatcattgacacatatagaagaaattgcaaataatctcaac
gtaggattacatactaagcgttttgatgaagtgtaccgttttgagaattctgacctagtc
aatttagagcgtaattttaatgcattacaatttgaacctagagtgtcaaatggtgatata
gcgattttagaagctagtgggatgagagaggaaataaatgaagttgctcgtcgtatttta
agagaaacacgtgaaaaaggatataggtttcaagacatcgctattttatatagagatgaa
gcctatgcttatctcatggagtcgattttgccgcaatttgacataccatataacatcgat
gtaaagccgtcaatgacacatcatcctattatggaaatgataagatcattgatagaagta
atacaaaccaattggaatttcgatccacttatgcggctttttaaaacggatattctgtcg
aagaaatttaaggatagtcattacttaatagatatattagagaattttgttttagaacgt
ggtatttatggcaaacgttggttggatgaaaaatattttgatattgaacaatttagaaaa
atgggtctaaaacgacagccattaacagatgaagaacgtgagacttttgaacgcgttatt
cagatgaaaacagatgtcatcaataaagtgatgatttttgaagagcgtatgaatcatgca
acaacagctattgaatttgcaactgctttctatgaatcattggaagctttcgacttacca
agccaattaatgaccgaacgtgatacgttagattttaacggccaacataaagacgctgaa
gaaattgaccagatatggcatggatttattcaaacactggatgacttagtcactgtgttt
ggcgagcaaacgatgtctaaatcacgttttctagaattgcttgatattggtttagaacag
ttagagtttgtaatgattccacagaaacttgatcaagtaagtgttggtactatggactta
gcaaaagtagataacaaacagcacgtatatttagtaggggcaaatgatggcgttataccg
caaaccgtttcatcttcaagtttaattacggacgaagagaagaaatattttcaagaacaa
tcctctatagaattaagtcctacggcagacatattgcaaatggatgaagcatttgtatgt
tatattgcgatgacgcgtagctgtaagcaggttacattttcatactcactcatgggttct
ggcggcgatcaaaaagaaccgagcccatttttaagtcaaattcaacaattatttactaat
ttagaagttcaaaatatacatcatcaacatcaagcgcaaccactcactttaatggaacat
ccgcatcaaactaaaattgctttgttcgaatcgttaaaggcttggttaggtgatgaaatt
gttgcagaaacttggttagatacatatcaagtaatgcgagatgatgaaagtttaaatgat
ggtttagattacttattatctgctttaacttatgataatgaaacggttcaattaagtgaa
tctttatctaaagaattgtacggttctacaattaacgcaagtgtgtctagatttgaaggt
tatcaagcttgtccctttaaacactttgcgtcacatggtttacgtttaaacgaacgtaca
aaatacaaattggaaaactttgatctgggagatattttccaccaagtattaaaattcatc
tcagaaaaagtgaatggtgattttaagaatctaaatccaaaacaaattcataagctaaca
gttgaagcattaagtgaaatattgcctgaagtacaatttaacttattaaattcaacagcc
tattaccgttatttatctcaacgtattggtgcaattgtagaaacgactttaatggcatta
aaatatcaaggtaactatactaaatttacgccacaacgatttgaagctggttttagaaga
aaaccaaaagataatagcgaattattagccaaaccattatatacaaaacaaggtatacct
ataaatatacgtggacagattgatcggatagatacgtataaaaatggcgaagagagtttt
gtaaatattattgactataagtcatctaaatatagtggaactttggatttaacaaaagtt
tattacggtatgcaaatgcaaatgatgacctatatggatatcgtacttcaaaataaatca
cgtctaggattaacagacctcactaaacctggcgggctattgtatttccatgtacatgaa
cctcgtattaaactagcatggaaccaattgtcggaagaaaaaagagactctgaattcatt
caatccttcaagttaagtggcttgctaaatagtgatgaatcagtattagatgcttttgat
agtagattggagccaagttataattctgatattgtacccttaggtttgaaaaaagatggc
gctattaaaagtaatagtaaggttgcagacgaagatactatttacaaattaattcatcat
aataaacaaaactttattgaaacggcatcaaatattatggatggacatacagaagtagcg
ccgatgaaatataatcagacgttaccatgtgacttttgtagttataaatcagtctgccat
gtagacggtatgatagatagtaaacgttatcgtacagttgacgagtctattgatccatta
gaagaagtgcagaatgtgattgtagaaagtgaggacgatggagaatga
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