Staphylococcus shinii: JMB28_10070
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Entry
JMB28_10070 CDS
T08256
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00450
Selenocompound metabolism
spsd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JMB28_10070
Enzymes [BR:
spsd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
JMB28_10070
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
JMB28_10070
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Pyridoxal_deC
SelA
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
QRA15984
LinkDB
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Position
complement(2134276..2135523)
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AA seq
415 aa
AA seq
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MSNLTDTLNVTEIIKDFPILNQQVNGNRLAYLDTTATSQTPVQVIDAMADYYKRYNSNVH
RGVHTLGSLATDGYESARETVRRFINAKYFEEVIFTRGTTASINIVAHSYGDANISEGDE
IVVTEMEHHANIVPWQQLAKRKNASLKFIPMTDDGELAIEDVKATINDNTKIVAVAHVSN
VLGTINDIKAITEVAHEHGAIISVDGAQAAPHMALDMQELDVDFYSFSGHKMLGPTGIGV
LYGKRALLNKMEPIEFGGDMIDFVGKYEASWADLPTKFEAGTPLIAQAIGLAEAIRYIEN
LGFEEIQQHETALTQYAYDKMSEIDGIEIYGPAKERRAGVITFNMTDVHAHDVATAVDTE
GVAVRAGHHCAQPLMKWLNQSSTARASFYIYNTQEDIDQLVEALKQTKEFFSYEF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaatttgactgatactttaaatgttaccgaaattataaaagattttccaattctc
aatcaacaagttaatggcaatcgcttggcttatttagatacaactgctactagtcagaca
cccgtgcaagttattgatgcaatggctgattattataaacgttataattcaaatgtacat
cgtggtgtacacacattagggtcattagcgacagatggttatgaaagtgctcgtgaaaca
gtgaggcgttttattaatgcaaaatactttgaagaagtcattttcactagaggtacaaca
gcatcaataaatattgtcgctcacagttatggggatgccaacatttcagaaggcgatgaa
attgtcgtcacggagatggaacatcatgctaacatcgtgccatggcaacaattggctaag
cgtaaaaacgcatcattaaaatttatcccaatgactgacgacggagaattagcaattgaa
gatgtcaaagctacaattaatgataatacaaaaattgtagctgtagcacacgtgtctaac
gtacttggtacaattaatgatatcaaagctataacagaagttgcacatgaacatggggca
attattagtgtagatggtgcacaagctgcgcctcacatggcattggatatgcaagaatta
gatgttgatttttacagctttagtggtcataaaatgctcggtccaacaggtattggtgtt
ttatatggtaagcgcgcattacttaataaaatggaaccaattgaatttggcggagatatg
attgattttgtaggcaaatatgaagcttcatgggctgacttacctactaaatttgaagct
ggtacacctttaatagctcaagcaattggcttagctgaagcgataagatatatagaaaac
ttaggttttgaagaaatccaacaacatgaaacagcactaacacagtacgcttacgacaag
atgtcagagatagatggtattgaaatttatggacctgcgaaagaaagacgtgctggtgtc
attactttcaatatgactgatgttcatgcgcatgatgtagcaactgcggtagatactgaa
ggagtggctgtaagagctgggcatcactgtgcacaaccacttatgaagtggttgaatcaa
tcttctactgcacgcgcaagtttttatatttataacacacaagaagatattgaccaactc
gtcgaagcgttgaaacagacgaaggagtttttctcatatgaattttaa
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