Staphylococcus shinii: JMB28_11500
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Entry
JMB28_11500 CDS
T08256
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMB28_11500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsd03400
]
JMB28_11500
Enzymes [BR:
spsd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JMB28_11500
DNA repair and recombination proteins [BR:
spsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JMB28_11500
Prokaryotic type
JMB28_11500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QRA16250
LinkDB
All DBs
Position
complement(2404799..2405455)
Genome browser
AA seq
218 aa
AA seq
DB search
MEWSDVFHDITTRHDFTAMHDFLEKEYTTEVVYPDKENIYQAFDLTPFEHVKVVILGQDP
YHGPNQAHGLAFSVQPDAKFPPSLRNMYKELEDDIGCVRKSPHLQDWAREGVLLLNTVLT
VRQGEAHSHKNIGWEIFTDEVIKAVSEQLKNVVFILWGKPAQQKIKLIDTTKHHIIQSPH
PSPLSAYRGFFGSKPYSLTNNYLQTNGIKPVNWCESED
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggaatggtcggatgtttttcatgatataactacgcgacatgactttactgccatgcat
gattttttagaaaaagagtatactactgaagtggtgtatcccgataaagaaaatatttat
caggcatttgatttaacgccttttgaacacgtgaaagtggtcatattaggtcaagatcct
tatcatggacctaatcaagcacacggactagctttttcagtacagccagatgccaagttt
ccgccttctttaagaaatatgtataaagaactggaagatgatattggttgtgtgagaaaa
tctccacatttacaagattgggcgcgtgagggtgtcttattattaaatactgttttgaca
gttcgccaaggagaagcgcattctcacaaaaatattggttgggaaatttttactgatgaa
gtgataaaagcggtatctgaacaattgaaaaatgttgtgtttattttatggggcaaacct
gcgcaacagaaaattaagctaatagacactacgaaacaccatattattcagtctccacat
ccaagtccgctgtcagcatatcgtggtttctttggatcaaaaccgtattctctgacaaat
aattatttacaaacaaatggcattaaaccagtgaattggtgtgagagtgaggattaa
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