Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_01179
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Entry
SULPSESMR1_01179 CDS
T04974
Symbol
rimK
Name
(GenBank) ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spse03009
]
SULPSESMR1_01179 (rimK)
Ribosome biogenesis [BR:
spse03009
]
Prokaryotic type
ribosomal protein modification factors
SULPSESMR1_01179 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ASM72003
UniProt:
A0A221JZB3
LinkDB
All DBs
Position
complement(1214198..1215577)
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AA seq
459 aa
AA seq
DB search
MDSLHFGWEEWIGLPELGLPALKAKIDTGARTSALHAHDIEVFGPAAKPKVRFNVYPVAG
QTQVQMTCSAEIKDRREITSSNGESELRYVIETTLEVAGQSWPIEVTLTDRSGMTSRMLL
GRQALQDHISITATEKRLQPDLSYDVYHSAAVRRAAPQRALRIAVLSREDNYSTRRLVEI
GEARGHTVEVIDTTRCYMAINTMAPEVHYDGKRLPRYDAVVPRIGASITPYGTAVIRQFE
TIGTYCVNGSAGITASRDKLHAHQVLASKRIGMPTTAFAASPKDTGNLIGLVGTAPLIVK
LLESTQGKGVVLAETKKAAESVIDAFRGLRANFLVQQFVKESAGEDIRCLVIDGKVVAAM
KRTGADGDFRSNLHRGGSAKTVRITKDERDTALRAARAFGLGKAGVDLLRSDSGPKVLEV
NSSPGFEGIEKATGKDIVGMLYDMIEARVKPQPVRKRKG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggacagtctacatttcggctgggaagaatggatcggcttgcccgaactgggtctgccc
gccctcaaggccaagatcgacaccggcgcgcgcacctcggcgctgcatgcccatgacatc
gaagtctttggccctgcggccaagcccaaagtgcggttcaacgtctaccccgtcgcgggc
cagacgcaggtgcagatgacctgttccgccgagatcaaggaccgccgcgaaatcacctcg
tccaacggcgaatccgagctgcgctatgtcattgaaaccacgttggaagttgcgggccag
tcttggcccatcgaagtgacgttgaccgaccggtccggcatgaccagccggatgctgctg
ggacgtcaggcgcttcaagatcacatttcgatcactgccacggaaaagcgtctgcaaccg
gacctcagctatgatgtctaccattctgccgccgtgcgccgtgccgccccgcagcgcgcc
ctgcgcattgcggtgctcagccgcgaggacaactattccacccgccgtctggtcgagatt
ggcgaggcgcgcggccacaccgtcgaagtgatcgacaccacgcgctgctatatggcgatc
aacacgatggcccccgaagtgcattatgatggcaaacgcctgccccgctatgacgcggtc
gtgccgcgcatcggcgcgtcgatcacgccctatggcaccgccgtgatccgccagttcgaa
accatcggcacctattgcgtcaacggcagcgcgggcatcaccgccagccgcgacaagctg
cacgcgcatcaggtgctggccagcaagcgcatcggtatgcccaccaccgcctttgccgcg
tcgcccaaggacaccggcaatctgattgggctggtgggaaccgcgccgctgatcgtgaaa
ctgctggaatcgacccaaggcaaaggcgtcgttctggccgaaaccaaaaaggccgccgaa
agcgtcatcgacgcctttcgtggcctgcgcgccaactttctggtgcagcaattcgtcaag
gaatcggcgggcgaagacatccgctgtctggtgatcgacggcaaagtggtcgctgcgatg
aagcgcaccggcgcggatggcgattttcgctcgaacctgcaccgtggcggatcggccaaa
accgtgcgcatcaccaaagacgaacgcgacaccgccctgcgcgccgcccgcgcctttggt
ctgggcaaggcaggcgtcgatctgctgcgctcggattccggccccaaagtgctcgaggtg
aattcctcgcccgggttcgagggcatcgaaaaggccacgggcaaggatattgtcgggatg
ctttacgatatgatcgaggcgcgggtgaaaccgcagcccgtgcgcaaacgcaaaggctga
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