Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_01958
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Entry
SULPSESMR1_01958 CDS
T04974
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Pathway
spse03420
Nucleotide excision repair
spse03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SULPSESMR1_01958 (uvrD)
03430 Mismatch repair
SULPSESMR1_01958 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spse03400
]
SULPSESMR1_01958 (uvrD)
Enzymes [BR:
spse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SULPSESMR1_01958 (uvrD)
DNA repair and recombination proteins [BR:
spse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SULPSESMR1_01958 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SULPSESMR1_01958 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ASM72765
UniProt:
A0A221K1A3
LinkDB
All DBs
Position
complement(1999460..2001898)
Genome browser
AA seq
812 aa
AA seq
DB search
MCVPIYVGGMSNFDEMDAFEGASLSARAMAARPQPYLDGLNPAQRAAVEQMDGPVLMLAG
AGTGKTRALTARIVHLLMMGRARPNEVLAVTFTNKAAREMKNRVGQMLGQQIEGMPWLGT
FHAICVKLLRRHAELVGLKSNFTILDRDDQLRLLKQLVSASGIDDKRWPARQLAGVIDAW
KNRALTPDKIPAADAGAYNHKGVELYAQYQRRLIDLNATDFGDLLLHMVTIFQKHPDVLE
QYQRWFRYILVDEYQDTNVAQYLWLRLLAGGHKNICCVGDDDQSIYGWRGAEVGNILRFE
KDFPGAHVVRLEQNYRSTPHILAAASGVIAGNANRLGKELWTEETEGELVRLIGHWDGEE
EARWIGEEIEAAQRGTRGLRAMNLDEMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFY
ERLEIRDAMAYFRIVVSNDNDLAFERIVNTPKRGLGDKAQQTIQITARANGVNLVEGARL
AVEQGLIKGKGGTELRKLVEGIDRWSAMMRASGTRIMDDDDSVVDTETDTPPDYNHIELA
EIILDDSGYTAHWQNDKTPEAAGRLENLKELINQLHNFENLQGFLEHVSLIMDNEQEGEG
AKVSIMTLHAAKGLEFPMVFLPGWEDGLFPSQRSMDESGVKGLEEERRLAYVGITRAEEV
CTISFVSNRFVFGQWQSALPSRFIDELPSDHVDVLTPPGLHGGNYGAAGMAGVKSRLHEA
AAEANVYNSPGWRRLQARSQDRSVSQPRETRNTTIDASAVSSFTVGERVFHQKFGYGAVV
GIEGDKLEIDFEKAGTKKVVSKFITGTDDIPF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgttccgatttatgtaggggggatgagcaatttcgatgaaatggacgccttcgag
ggcgcttcgctgtccgcacgcgcgatggccgcgcgcccgcaaccctatctggacggtctg
aatccggcccaacgtgccgcagttgaacagatggacggccccgtgctgatgctggcgggg
gcaggcaccggcaagacccgcgcgctgaccgcgcgaatcgtgcatctgctgatgatgggt
cgtgcgcgccctaacgaagtgctggcggtgacctttaccaacaaggccgcgcgcgagatg
aagaaccgcgtgggccagatgctgggccagcagatcgaggggatgccctggctgggcacc
ttccacgcgatctgcgtcaagctgttgcggcggcatgcggaactggtggggttgaagtcg
aactttacgattctggacagagatgaccagctgcgcttgctgaaacaactggtcagcgcg
tcgggcatcgacgacaaacgctggcccgcgcggcaactggccggtgtcatcgatgcgtgg
aaaaaccgcgctctgacacccgacaagattccggcagcggatgcgggggcctataaccac
aaaggcgtagagctttatgcccaataccagcgtcgcctgatcgacctgaacgccaccgat
ttcggtgatctgctgttgcacatggtcacgatctttcaaaagcaccccgacgtgttggag
caataccagcgttggttccgctacatccttgtggacgaataccaagataccaacgtcgcc
caatacctgtggctgcggctgctggcaggtgggcacaaaaacatctgttgcgtgggtgac
gacgaccagtcgatctatggctggcgcggcgccgaggtgggcaatatcctgcggttcgaa
aaggattttccgggcgcgcatgttgtccggctggaacagaactaccgctcgaccccgcat
attctggccgccgcttccggcgtgatcgcaggtaatgcgaaccgtctgggcaaggaattg
tggacggaagagaccgaaggcgaactggtccgtctgatcggccattgggacggcgaggaa
gaggcccgctggatcggtgaagagatcgaggccgcacagcgcggcacacgcggtttgcgg
gcgatgaacctcgacgaaatggccatcctcgtgcgcgcctcgcaccagatgcgtgccttc
gaggatcggttcctgaccatcggtctgccctaccgcgtcatcggcggcccgcgtttctac
gagcgtttggagatccgcgacgcgatggcctatttccgcatcgtggtgtccaacgacaac
gacctcgcgttcgagcggatcgtgaacacccccaagcgcggactgggcgacaaggcacag
cagaccatccagatcaccgcgcgcgccaacggcgtcaacctggtcgaaggggcgcggctg
gcggtcgagcaggggttgatcaagggcaagggcgggaccgagctccgcaagctggtcgag
gggatcgaccgttggtctgccatgatgcgcgccagtggcacccggatcatggacgacgac
gacagcgtggtggacacggaaaccgacacgccgcccgactacaaccatatcgaactggcc
gaaatcatcctcgacgacagcggctataccgcccactggcagaacgacaagacgcccgaa
gcggcggggcgtctggaaaacctcaaggaactgatcaaccagctgcacaacttcgagaac
cttcaggggtttctggaacacgtcagcctgatcatggacaacgaacaagagggcgagggc
gccaaggtcagcataatgaccctgcacgcggccaaaggtcttgaattcccgatggtcttt
ctgccgggttgggaggacggtctgttcccctcgcaacgctcgatggacgaaagcggggtc
aagggactggaggaagagcgccgccttgcctatgtcggcatcacccgtgccgaagaagtc
tgcacaatttccttcgtgtccaaccggttcgtctttgggcaatggcaatcggcgctgccg
tcacggttcatcgacgaattgccatcggatcacgtggacgttctgaccccgccgggcctg
cacggtggcaactacggcgctgccggtatggcgggtgtcaaatcccgtctgcacgaggcc
gcagccgaggcgaacgtctataattcgcccggatggcggcggttgcaggcgcgcagccag
gaccggtcggtcagccagccacgcgaaacccgcaacaccacaatcgacgccagtgcggtc
agcagctttaccgtgggcgaacgggtattccatcaaaagttcggctatggcgcggtggtg
gggatcgagggcgacaagctggagatcgactttgaaaaggcgggaaccaagaaggtcgtg
tcgaaattcatcaccggcacggacgacattccgttttga
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