Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_02929
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Entry
SULPSESMR1_02929 CDS
T04974
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Pathway
spse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SULPSESMR1_02929 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spse03019
]
SULPSESMR1_02929 (pnp)
03016 Transfer RNA biogenesis [BR:
spse03016
]
SULPSESMR1_02929 (pnp)
Enzymes [BR:
spse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SULPSESMR1_02929 (pnp)
Messenger RNA biogenesis [BR:
spse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SULPSESMR1_02929 (pnp)
Transfer RNA biogenesis [BR:
spse03016
]
Prokaryotic type
tRNA degradation factors
SULPSESMR1_02929 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
LTXXQ
Motif
Other DBs
NCBI-ProteinID:
ASM73710
UniProt:
A0A221K4A9
LinkDB
All DBs
Position
2936831..2938963
Genome browser
AA seq
710 aa
AA seq
DB search
MFNVTTKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFATKQKPGQDFFPLT
VHYQEKYYAAGKVPGGFFKREARPTEKETLTARLIDRPIRPLFVPGFKNEVLVMCTVLSH
DLVNDPDMVAMIAASAALTISGAPFMGPIAACRVGFEGGDYVLNPTVDDMQDLRLNPDQR
LDLVVAGTKDAVMMVESEAYELSETEMLGAVKFAHEQIQPVIDLIIELAESSAKEPFDFQ
PADYSELSAAVKAAGETEMRAAFAISDKQERTSAVAAARDTILAALSDEQKEDPNLGSAL
KKLEASILRGDVVKTGKRIDGRKTDEIRDIVCETGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVSGPGRREIGHGKLAWRALQAVLPA
STDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
ILSDILGDEDHLGDMDFKVAGTENGITSLQMDIKIAGITPEIMEKALEQAKAGRMHILGE
MNKALTGASDFSVHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIKI
ASPNGEAIKKAYDMIWSIVAEPEEGAVYTGTVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVKVKLLGFDDRGKVRLSMKVVDQETGEEVKKEEDAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgtaacgacgaaatcgatgcagtggggcgaagagacgctgacactggaaacc
ggaaaagtggcccgtcaggcggacgggtctgtgatcgccacgctgggcgagacttcggtc
atggcaaacgtaacctttgccacaaaacaaaaacccggtcaggattttttcccgctgacc
gtccattaccaagagaaatactatgctgcgggcaaagtgcccggtggctttttcaaacgt
gaggcccgccccaccgagaaagaaaccctgaccgcgcgtttgatcgaccgtccgatccgc
ccgctgttcgtccccggctttaaaaacgaagttctggtgatgtgtaccgttctgtcccat
gatctggtcaacgacccggatatggttgcgatgatcgccgccagtgccgcgctgaccatt
tcaggtgcgccctttatgggtccgatcgcggcttgccgcgttggtttcgagggcggcgat
tacgtcctgaaccccacggtcgacgacatgcaagacctgcgcctgaaccccgatcagcgt
cttgatctggttgttgccggcaccaaagacgccgtgatgatggttgaatccgaagcctac
gagctgtcggaaaccgaaatgctgggtgcggtgaaattcgcacatgaacaaatccagccg
gtcatcgacctgatcatcgaactggctgaaagctctgcaaaagagccgttcgatttccag
cctgccgactattccgaattgtccgctgctgtcaaagccgctggcgagacagaaatgcgc
gccgcctttgcgatcagcgacaagcaagagcgcacatcggctgttgctgctgcccgtgac
accattctggcggccctgtcggacgaacaaaaagaagacccgaacctgggttctgcgttg
aagaagctggaagcgtctatcctgcgcggtgacgtggtgaaaacaggcaagcgcatcgac
ggtcgtaaaaccgacgagatccgtgacatcgtgtgcgaaaccggtcttctgccgcgcacc
cacggttcggccttgttcacccgtggcgaaacccaaggtctggttgtgaccacgctgggc
accggcgatgacgaacagttcatcgacgccttgcacggcaacttcaaatccaacttcctg
ctgcactataacttccccccctattctgtgggtgaagtgggtcgtgtctctggcccgggc
cgtcgcgaaattggccacggcaagctggcatggcgcgcgctgcaggcagttctgcccgca
tcgaccgacttcccttataccatccgcgtcgtctccgagatcactgaatccaacggttcc
agctcgatggcatcggtctgcggcggttcgctgtcgatgatggacgcgggcgttccgctg
aaatcggctgtggccggtgtggcgatgggtctgatcctggaagaagacggctcctacgcg
atcctgtccgacattctgggtgacgaagaccacctgggcgacatggactttaaagtggcc
ggtaccgaaaacggcatcacgtcgttgcagatggacatcaagatcgcaggcatcacgccc
gagatcatggaaaaagctctggagcaggccaaagcgggccgtatgcacattctgggcgag
atgaacaaagcgctgaccggcgcgtcggacttctcggttcacgcaccgcgcatcgaaacc
atgcaggttccgacagacaaaatccgcgaagtcatcggttcgggcggcaaagtgatccgt
gaaatcgttgaagtgtcgggcgccaaagtcgacatcaacgacgacggcatcatcaagatt
gcgtcgcccaacggcgaagcgatcaagaaagcctatgacatgatctggtcgatcgtggcc
gaacccgaagaaggtgcggtttataccggcaccgtcgtgaagatcgtcgatttcggcgcc
ttcgtgaacttctttggcaagcgcgatggtctggtccacgtcagccagatcgaaaaccgc
cgtctgaaccatccgtcggatgtgctgaaagaaggccaagaggtcaaagtgaagctgttg
ggctttgatgaccgtggcaaggtgcgcctgtcgatgaaagtcgtcgatcaggaaaccggc
gaagaagtcaaaaaagaagaagacgccgaataa
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