Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_03083
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Entry
SULPSESMR1_03083 CDS
T04974
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spse03016
]
SULPSESMR1_03083 (rnd)
Enzymes [BR:
spse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SULPSESMR1_03083 (rnd)
Transfer RNA biogenesis [BR:
spse03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SULPSESMR1_03083 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASM73860
UniProt:
A0A221K4P7
LinkDB
All DBs
Position
3091093..3091707
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AA seq
204 aa
AA seq
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MTNHLYKSDLPDDLDLGPVVAIDCETMGLNPHRDRLCVVQLSGGDGNAHMVQIAKGQTEA
PNLCALLENPDVLKLFHFGRFDIAAMLNAFGTVTAPVYCTKIASKLVRTYTDRHGLKNLL
QELLGIDISKHQQSSDWGAAQLTDAQLDYAASDVLYLHRLREALNKRLQREDRMDIAQSC
FDFLPTRAKLDIAGWPDTDIFAHL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatcatttgtacaaatccgatctgcccgacgatctggaccttggtccggttgtc
gcgattgattgtgaaacgatgggcctgaacccgcaccgcgatcggctgtgcgtggtgcaa
ctgtcgggcggagacggcaatgcccatatggtgcaaattgccaaaggccagaccgaggcg
ccgaacctatgcgcgttactggaaaaccccgatgtactgaaactgttccactttggccgc
tttgacatcgccgcgatgctgaatgcctttggcacagtaaccgcgcccgtctattgcacc
aagatcgcaagtaagctggtccgcacctataccgaccgtcacgggctgaaaaatctgctg
caagagctgctgggcatcgacatctcgaagcatcagcaaagcagtgactggggtgccgcc
caactgaccgacgcacagttggattatgccgcctccgatgttttgtacctgcaccgtctg
cgcgaggcgctgaacaagcggctgcagcgcgaggaccggatggatattgcccagtcctgc
tttgactttctgccaacccgcgccaaactggacattgcaggctggcccgacacggatatt
tttgcccacttatga
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