Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_03163
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Entry
SULPSESMR1_03163 CDS
T04974
Symbol
cca
Name
(GenBank) CCA-adding enzyme
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Pathway
spse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SULPSESMR1_03163 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spse03019
]
SULPSESMR1_03163 (cca)
Enzymes [BR:
spse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SULPSESMR1_03163 (cca)
Messenger RNA biogenesis [BR:
spse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SULPSESMR1_03163 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ASM73940
UniProt:
A0A221K4Y4
LinkDB
All DBs
Position
complement(3171050..3172204)
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AA seq
384 aa
AA seq
DB search
MKLPADVPWLNDAGALALCSTLESAGFQALFVGGCVRNAVMGIAASDIDIATDATPDEVQ
KVCKAAGFKTIPTGIDHGTLTVVIGSEPYEVTTFRNDVTTNGRHAVVAFSTHVVEDARRR
DFTMNALYARSDGTLVDPLGGLPDALARRVIFINDAAARIREDYLRILRFFRFSAWYADP
VHGFDADALAAIAEHLDGLAQLSAERVGSEMTKLLGAPDPAPAVAVMERVGVLPRLLCGA
QARWLAPLIHAESMLDLSPDPMRRLVVLGGEDVAERLRLSKADARKTQLLGELVGTAVGA
AELGYRYGLATALDVIALRAALFETPLNKGDAAAATRGSAAKFPVAAHDLMPALHGPALG
AKLKELETRWIASGFILTRAQLLG
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgcccgctgatgtgccttggctgaacgatgccggggcgctggcgttgtgttca
acgttagaatctgcgggatttcaggcgttgtttgtgggtggctgtgtgcgcaatgccgtt
atgggcattgcagccagcgatattgatattgccacagacgcaacgcctgacgaggttcaa
aaggtctgcaaagcggcggggttcaagacaatcccgacaggcattgatcatggcaccctg
accgttgtgatcggcagtgaaccctatgaggtcactacttttcgcaacgatgtcacgacc
aatggccgtcacgccgttgtcgcgttttcgactcacgtggtcgaggacgcccgacggcgc
gatttcacgatgaatgcgctttatgcgcggtctgatggaacgctggttgatccgctgggt
ggtttgcccgatgcgttggcgcgtcgggtgatctttatcaacgatgctgcggcccgcatc
cgcgaggattatctgcgcattctgcggtttttccggttttcggcttggtacgccgacccg
gtgcatggctttgatgcggatgcactggcggcaattgccgaacatctggacggattggcg
caactctctgccgagcgcgtcgggtccgagatgacaaagctgttgggtgcacccgatccc
gcgcccgccgttgcggtgatggagcgtgtcggggtgctgccgcgattgttgtgtggcgca
caggcgcggtggctggcgccgttgatccacgccgaatccatgcttgacctgtcacctgat
ccgatgcgccgtctggtagttctggggggcgaggatgtggccgagcgtctgcgtttgtcc
aaggcggatgcgcgtaaaacccagttgctgggtgaactggttggcacagccgtaggcgcg
gcagaactgggttaccggtacggtctggccacagcactggacgtgatcgctttgcgggct
gcgttgttcgaaacccctttaaacaagggcgatgcggcggcagcgacacgtggcagcgcg
gcaaagtttccggtcgctgcgcatgacctgatgcccgccctgcacggccctgcactgggt
gcgaaattgaaagaactggaaacgcgctggatcgcttccggttttatcctgacccgcgcg
cagcttttgggctga
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