Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_03187
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Entry
SULPSESMR1_03187 CDS
T04974
Symbol
fliI
Name
(GenBank) ATP synthase
KO
K03628
transcription termination factor Rho
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Pathway
spse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SULPSESMR1_03187 (fliI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spse03021
]
SULPSESMR1_03187 (fliI)
03019 Messenger RNA biogenesis [BR:
spse03019
]
SULPSESMR1_03187 (fliI)
Transcription machinery [BR:
spse03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SULPSESMR1_03187 (fliI)
Messenger RNA biogenesis [BR:
spse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SULPSESMR1_03187 (fliI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
S1CSD-TOTE-2
ATPase_2
AAA
OB_RNB
AAA_25
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
ASM73964
UniProt:
A0A221K4N0
LinkDB
All DBs
Position
complement(3196480..3197793)
Genome browser
AA seq
437 aa
AA seq
DB search
MCRLLRVCMTTETTEINECLTLAELKANSPKDLLAMAEELEIENASTMRKGEMMFQILRE
RADEGWDVSGDGVLEVLQDGFGFLRSPEANYLSGPDDIYVSPEMIRKYSLRTGDTIDGGI
RAPDNDERYFALTDVANINFEDPEKARHKIAFDNLTPLYPDERLTMETDEPTTKDRSARI
IDLVSPIGKGQRSLIVAPPRTGKTVLLQNIANSIERNHPECYLIVLLIDERPEEVTDMQR
SVKGEVISSTFDEPATRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSS
GKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNS
EIVLDRKIADKRVFPAIDILKSGTRKEELLVDKIDLAKTFVLRRILNPMGTTDAIEFLIS
KLKQTKTNSDFFDSMNT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ttgtgccggctgctacgtgtttgcatgacaaccgaaacaactgagataaacgaatgtctg
actctggccgagttgaaagccaatagccccaaagatctgctagcgatggccgaagagctt
gagatcgagaatgcttcgaccatgcgcaaaggcgagatgatgttccaaatcttgcgtgaa
cgcgcggacgaaggctgggacgtgtctggtgatggcgtgttggaagtgctgcaagacggt
tttggatttttgcgctcgcccgaggcgaactatctgtccggccccgatgacatctatgtc
tcgcccgaaatgatccgtaaatattcgctgcgcaccggtgataccattgatggtggaatt
cgtgctcctgacaatgacgaacgctattttgcgctgacagatgtggcaaacatcaacttt
gaagaccctgaaaaggcgcgtcacaagattgcctttgacaacctgacgccgttgtacccc
gatgagcgtctgacgatggaaaccgacgagcccacgaccaaagaccggtcggcgcggatc
attgatctggtttcgcccattggtaaaggtcagcgttcgttgatcgtggcaccgccgcgc
acaggtaaaacagtgctgttgcaaaacatcgccaacagcatcgaacgcaatcaccccgaa
tgctatctgattgttctgctgattgatgagcggccggaagaggtcaccgacatgcagcgt
tcggtcaagggcgaagttatcagttcaacctttgacgaacctgcaacgcgtcacgtcgcc
gtttcggaaatggttattgaaaaggccaagcgtctggtcgaacacaagcgtgacgttgtt
atcctgttggactcgatcacccgtctgggccgtgcgttcaacaccgtcgtgccgtcgtcg
ggcaaggttctgaccggtggtgtggatgccaacgcgctgcaacgccccaagcgtttcttt
ggtgcggcacgcaacatcgaagagggcggtagcctgaccatcatcgccactgctctgatc
gataccggcagccggatggacgaggtgatctttgaagaattcaaaggtacgggtaactcg
gaaatcgtgctggatcgcaagattgcagacaaacgcgtgttcccggccattgacatcttg
aaatccgggacgcgaaaagaagaactgctggtggataagattgacctggcaaaaaccttt
gttctgcgccgtattctgaacccgatgggtacgacggatgcaatcgagttcctgatttcc
aagttgaagcagaccaagaccaactcggatttcttcgattccatgaacacctga
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